BLASTX nr result

ID: Atractylodes21_contig00043120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043120
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36552.3| unnamed protein product [Vitis vinifera]              228   4e-58
ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containi...   228   4e-58
ref|XP_002309359.1| predicted protein [Populus trichocarpa] gi|2...   222   3e-56
ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   213   1e-53
ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containi...   213   1e-53

>emb|CBI36552.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  228 bits (581), Expect = 4e-58
 Identities = 114/152 (75%), Positives = 128/152 (84%)
 Frame = +2

Query: 2    LFELDPENVGYHVLLSNIYTADKNYHEAASVRQVVRNRNLAKTLGCTLIEINKIPHVFTS 181
            LFELDP+NVGY+VLLSNIY+A +NY EAASVR VV+ R LAKT GCTLIE+    H+FTS
Sbjct: 549  LFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTS 608

Query: 182  GQQSHPQTEAIYAMLEKLMGKMREAGFQTDTMTALHDVXXXXXXLMVKVHSDKLAIAYGL 361
            G QSHPQ  AIYAMLEKL GKMREAGFQT+T TALHDV      LMVKVHS+KLAIA+GL
Sbjct: 609  GDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGL 668

Query: 362  INTETGTEIRIIKNLRVCIDCHNFSKFVSKIT 457
            I +E GTEIRIIKNLRVC+DCHN +KF+SKIT
Sbjct: 669  ITSEPGTEIRIIKNLRVCLDCHNATKFISKIT 700


>ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
            [Vitis vinifera]
          Length = 781

 Score =  228 bits (581), Expect = 4e-58
 Identities = 114/152 (75%), Positives = 128/152 (84%)
 Frame = +2

Query: 2    LFELDPENVGYHVLLSNIYTADKNYHEAASVRQVVRNRNLAKTLGCTLIEINKIPHVFTS 181
            LFELDP+NVGY+VLLSNIY+A +NY EAASVR VV+ R LAKT GCTLIE+    H+FTS
Sbjct: 604  LFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTS 663

Query: 182  GQQSHPQTEAIYAMLEKLMGKMREAGFQTDTMTALHDVXXXXXXLMVKVHSDKLAIAYGL 361
            G QSHPQ  AIYAMLEKL GKMREAGFQT+T TALHDV      LMVKVHS+KLAIA+GL
Sbjct: 664  GDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGL 723

Query: 362  INTETGTEIRIIKNLRVCIDCHNFSKFVSKIT 457
            I +E GTEIRIIKNLRVC+DCHN +KF+SKIT
Sbjct: 724  ITSEPGTEIRIIKNLRVCLDCHNATKFISKIT 755


>ref|XP_002309359.1| predicted protein [Populus trichocarpa] gi|222855335|gb|EEE92882.1|
           predicted protein [Populus trichocarpa]
          Length = 605

 Score =  222 bits (565), Expect = 3e-56
 Identities = 105/152 (69%), Positives = 129/152 (84%)
 Frame = +2

Query: 2   LFELDPENVGYHVLLSNIYTADKNYHEAASVRQVVRNRNLAKTLGCTLIEINKIPHVFTS 181
           LFELDPEN+GY+VL+SNIY+ ++ Y +AASVRQV + + LAKT GCTLIEI ++PHVFTS
Sbjct: 428 LFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTS 487

Query: 182 GQQSHPQTEAIYAMLEKLMGKMREAGFQTDTMTALHDVXXXXXXLMVKVHSDKLAIAYGL 361
           G QSHPQ++AIYA L+KL GKM EAGFQT+T T LHD+      L +KVHS+KLAIA+GL
Sbjct: 488 GDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIAFGL 547

Query: 362 INTETGTEIRIIKNLRVCIDCHNFSKFVSKIT 457
           I+TE G EIRIIKNLRVC+DCHN++KF+SKIT
Sbjct: 548 ISTEPGAEIRIIKNLRVCLDCHNWTKFLSKIT 579


>ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  213 bits (543), Expect = 1e-53
 Identities = 107/153 (69%), Positives = 128/153 (83%), Gaps = 1/153 (0%)
 Frame = +2

Query: 2    LFELDPENVGYHVLLSNIYTADKNYHEAASVRQVVRNRNLAKTLGCTLIEINKIPHVFTS 181
            LF+LDPENVGY+VLLSNIY+ D+N+ +AASVRQVV+ R LAKT GCTLIEI+   +VFTS
Sbjct: 610  LFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTS 669

Query: 182  GQQSHPQTEAIYAMLEKLMGKMREAGFQTDTM-TALHDVXXXXXXLMVKVHSDKLAIAYG 358
            G +SHPQ  AI+ MLEKL GKMREAG+Q +T+ TALHDV      LMV VHS+KLAIA+G
Sbjct: 670  GDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFG 729

Query: 359  LINTETGTEIRIIKNLRVCIDCHNFSKFVSKIT 457
            LI+T+ GTEIRIIKNLRVC+DCH  +KF+SKIT
Sbjct: 730  LISTKPGTEIRIIKNLRVCLDCHTATKFISKIT 762


>ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700-like
            [Cucumis sativus]
          Length = 788

 Score =  213 bits (543), Expect = 1e-53
 Identities = 107/153 (69%), Positives = 128/153 (83%), Gaps = 1/153 (0%)
 Frame = +2

Query: 2    LFELDPENVGYHVLLSNIYTADKNYHEAASVRQVVRNRNLAKTLGCTLIEINKIPHVFTS 181
            LF+LDPENVGY+VLLSNIY+ D+N+ +AASVRQVV+ R LAKT GCTLIEI+   +VFTS
Sbjct: 610  LFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTS 669

Query: 182  GQQSHPQTEAIYAMLEKLMGKMREAGFQTDTM-TALHDVXXXXXXLMVKVHSDKLAIAYG 358
            G +SHPQ  AI+ MLEKL GKMREAG+Q +T+ TALHDV      LMV VHS+KLAIA+G
Sbjct: 670  GDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFG 729

Query: 359  LINTETGTEIRIIKNLRVCIDCHNFSKFVSKIT 457
            LI+T+ GTEIRIIKNLRVC+DCH  +KF+SKIT
Sbjct: 730  LISTKPGTEIRIIKNLRVCLDCHTATKFISKIT 762


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