BLASTX nr result

ID: Atractylodes21_contig00043077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043077
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
emb|CBI24193.3| unnamed protein product [Vitis vinifera]              114   1e-23
emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]   114   1e-23

>ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|222853577|gb|EEE91124.1|
            predicted protein [Populus trichocarpa]
          Length = 908

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/69 (82%), Positives = 65/69 (94%)
 Frame = -1

Query: 208  YTKLDELKKMIKEAGYVPDTSFALQDTDEEQKEDHLWKHSERLALAYGLINTPEGSSLQI 29
            Y KL+ELKKMIKEAGY+PD S+ALQDTDEEQKE +LW HSERLALAYGLI++PEGS+L+I
Sbjct: 802  YAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKI 861

Query: 28   FKNLRVCGD 2
            FKNLRVCGD
Sbjct: 862  FKNLRVCGD 870


>ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 934

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/69 (76%), Positives = 64/69 (92%)
 Frame = -1

Query: 208  YTKLDELKKMIKEAGYVPDTSFALQDTDEEQKEDHLWKHSERLALAYGLINTPEGSSLQI 29
            Y KL+ELKK+I+EAGY+PDTS++LQDTDEEQKE +LW HSER+ALA+GLIN+ EGS L+I
Sbjct: 828  YAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRI 887

Query: 28   FKNLRVCGD 2
            FKNLRVCGD
Sbjct: 888  FKNLRVCGD 896


>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/67 (82%), Positives = 59/67 (88%)
 Frame = -1

Query: 202  KLDELKKMIKEAGYVPDTSFALQDTDEEQKEDHLWKHSERLALAYGLINTPEGSSLQIFK 23
            KL EL KM KEAGYVPDTSFAL D DEEQKE +LW HSERLALA+GLINTPE S+L+IFK
Sbjct: 1620 KLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFK 1679

Query: 22   NLRVCGD 2
            NLRVCGD
Sbjct: 1680 NLRVCGD 1686


>emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/67 (82%), Positives = 59/67 (88%)
 Frame = -1

Query: 202  KLDELKKMIKEAGYVPDTSFALQDTDEEQKEDHLWKHSERLALAYGLINTPEGSSLQIFK 23
            KL EL KM KEAGYVPDTSFAL D DEEQKE +LW HSERLALA+GLINTPE S+L+IFK
Sbjct: 979  KLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFK 1038

Query: 22   NLRVCGD 2
            NLRVCGD
Sbjct: 1039 NLRVCGD 1045


>emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/67 (82%), Positives = 59/67 (88%)
 Frame = -1

Query: 202  KLDELKKMIKEAGYVPDTSFALQDTDEEQKEDHLWKHSERLALAYGLINTPEGSSLQIFK 23
            KL EL KM KEAGYVPDTSFAL D DEEQKE +LW HSERLALA+GLINTPE S+L+IFK
Sbjct: 970  KLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFK 1029

Query: 22   NLRVCGD 2
            NLRVCGD
Sbjct: 1030 NLRVCGD 1036


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