BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043071
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75582.1| hypothetical protein VITISV_015970 [Vitis vinifera]   108   4e-22
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   105   5e-21
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   103   1e-20
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   103   1e-20
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              103   1e-20

>emb|CAN75582.1| hypothetical protein VITISV_015970 [Vitis vinifera]
          Length = 1022

 Score =  108 bits (270), Expect = 4e-22
 Identities = 53/93 (56%), Positives = 67/93 (72%)
 Frame = +1

Query: 1    QAPRAWFTKLSTALHQLGFYGSKTDPSLFILNSSGSLVYLLVYVDDIIITGNNSTAVASI 180
            QAP AW+T L TA+ QLGF  SK D SLFI +   +L Y LVYVDD +ITGNN T VASI
Sbjct: 756  QAPWAWYTTLKTAILQLGFQNSKADSSLFIYSQGSTLCYFLVYVDDFVITGNNPTLVASI 815

Query: 181  IQKLDSLFALKDMGQLHYFLRVEVVHKGSDLVL 279
            I++L  +F+LKD+G LH+FL +EV+   + L L
Sbjct: 816  IKQLGDMFSLKDIGSLHFFLGIEVIPTKAXLFL 848


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/93 (53%), Positives = 67/93 (72%)
 Frame = +1

Query: 1    QAPRAWFTKLSTALHQLGFYGSKTDPSLFILNSSGSLVYLLVYVDDIIITGNNSTAVASI 180
            Q PRAW+++LS  L  LGF  SK D SLFI N+  + +Y+LVYVDDIIITG++  A+ ++
Sbjct: 1076 QRPRAWYSRLSEKLQSLGFVPSKADVSLFIYNAHSTAIYILVYVDDIIITGSSPHAIDNV 1135

Query: 181  IQKLDSLFALKDMGQLHYFLRVEVVHKGSDLVL 279
            + KL   FA+KD+G LHYFL +EV  KG  L+L
Sbjct: 1136 LAKLKDDFAIKDLGDLHYFLGIEVHRKGDGLLL 1168


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/93 (50%), Positives = 67/93 (72%)
 Frame = +1

Query: 1    QAPRAWFTKLSTALHQLGFYGSKTDPSLFILNSSGSLVYLLVYVDDIIITGNNSTAVASI 180
            QAPRAW+++LS  L+ LGF GSK D SLF  N  G ++++L+YVDDII+T +   AV+++
Sbjct: 1090 QAPRAWYSRLSKKLYDLGFQGSKGDTSLFFYNKGGLIIFVLIYVDDIIVTSSRQEAVSAL 1149

Query: 181  IQKLDSLFALKDMGQLHYFLRVEVVHKGSDLVL 279
            +Q L   FALKD+G LHYFL +EV     +++L
Sbjct: 1150 LQDLKKEFALKDLGDLHYFLGIEVNKVTDEIIL 1182


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 932

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/93 (51%), Positives = 66/93 (70%)
 Frame = +1

Query: 1   QAPRAWFTKLSTALHQLGFYGSKTDPSLFILNSSGSLVYLLVYVDDIIITGNNSTAVASI 180
           QAPRAW+++LST L +LGF  SK D SLF  N  G  +++LVYVDDII+  +++  VA++
Sbjct: 577 QAPRAWYSRLSTKLQELGFISSKADTSLFFYNKGGCTIFILVYVDDIIVASSSAEVVAAL 636

Query: 181 IQKLDSLFALKDMGQLHYFLRVEVVHKGSDLVL 279
           ++ L+  FALKD+G LHYFL +EV      LVL
Sbjct: 637 LKDLEKDFALKDLGDLHYFLGIEVKKVSQGLVL 669


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/93 (51%), Positives = 66/93 (70%)
 Frame = +1

Query: 1    QAPRAWFTKLSTALHQLGFYGSKTDPSLFILNSSGSLVYLLVYVDDIIITGNNSTAVASI 180
            QAPRAWF   S  L +LGF  S+ D S+F  N+ G  + LL+YVDDI+ITGNNS+ ++ +
Sbjct: 1025 QAPRAWFRCFSDYLEELGFLESRADYSMFTFNNRGIYIILLIYVDDILITGNNSSHISHL 1084

Query: 181  IQKLDSLFALKDMGQLHYFLRVEVVHKGSDLVL 279
            I  L+SLF++KD+G +HYFL +E V+ G  L L
Sbjct: 1085 IHNLNSLFSMKDLGSVHYFLGIETVYNGDHLHL 1117