BLASTX nr result

ID: Atractylodes21_contig00043015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043015
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   107   1e-21
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   105   3e-21
emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]    70   2e-10
ref|XP_004170075.1| PREDICTED: uncharacterized protein LOC101232...    69   5e-10
ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213...    69   5e-10

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/101 (48%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
 Frame = -1

Query: 300 GNSDVILGIQWLEKLGAVTTNWKTQVMTFRLNGTPITLKGDPSLERAHVTLKNMWRSIIK 121
           GNSD+ILG+QWLEKLG + TNWKTQ + ++     +TL+G+P+L R  V+LK M+R++ K
Sbjct: 500 GNSDLILGVQWLEKLGTMVTNWKTQTLQYKEGNETVTLRGNPALSRTEVSLKAMYRTLRK 559

Query: 120 EGGGYLIQLNQVEG-QSETGKFPVAAPFLQPILNKFQHVFN 1
           EGGG+L+ LNQ+   +    + P     LQP+L+ +Q VFN
Sbjct: 560 EGGGFLVDLNQMASHEGLPRELPEVPSCLQPLLSSYQQVFN 600


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/104 (52%), Positives = 70/104 (67%), Gaps = 5/104 (4%)
 Frame = -1

Query: 300 GNSDVILGIQWLEKLGAVTTNWKTQVMTFRLNGTPITLKGDPSLERAHVTLKNMWRSIIK 121
           GNSDVILG+QWLE LG V +NWKTQ M+F+L G P TL GDP+L R+ V+LK M R++ K
Sbjct: 564 GNSDVILGVQWLETLGTVVSNWKTQKMSFQLGGVPYTLTGDPTLARSKVSLKAMLRTLRK 623

Query: 120 EGGGYLIQLNQVE----GQSETGKF-PVAAPFLQPILNKFQHVF 4
           EGGG  ++ NQVE    G     K      PFLQ ++ +F+ VF
Sbjct: 624 EGGGLWLECNQVEAGGAGSIRDSKVEQEIPPFLQELMRRFEGVF 667


>emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]
          Length = 1242

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/77 (48%), Positives = 45/77 (58%)
 Frame = -1

Query: 300 GNSDVILGIQWLEKLGAVTTNWKTQVMTFRLNGTPITLKGDPSLERAHVTLKNMWRSIIK 121
           GN+DVILG+ WL  LG V  NWK   M  +L    I LKGDPSL R  V+LK M R++  
Sbjct: 285 GNTDVILGMPWLGTLGDVKVNWKMLTMKIKLGKIVILLKGDPSLSRTEVSLKAMVRALQH 344

Query: 120 EGGGYLIQLNQVEGQSE 70
            G G  ++L Q    SE
Sbjct: 345 HGQGVWVELCQTSTTSE 361


>ref|XP_004170075.1| PREDICTED: uncharacterized protein LOC101232562, partial [Cucumis
           sativus]
          Length = 497

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
 Frame = -1

Query: 300 GNSDVILGIQWLEKLGAVTTNWKTQVMTFRLNGTPITLKGDPSLERAHVTLKNMWRSIIK 121
           G+ D ILG+QWL  LG    +WK  ++TF  +G  I ++GDPSL +A V+LK + +S   
Sbjct: 141 GSVDAILGMQWLYSLGITEVDWKNLILTFTHHGEKIVIRGDPSLTKARVSLKTLMKSWGD 200

Query: 120 EGGGYLIQL------NQVEGQSETGKFPVAAPFLQPILNKFQHVF 4
           +  G+L++         +EG    G+       +  +L  F+ VF
Sbjct: 201 KDQGFLVECRALERRESLEGDDSFGEVLTVEESVAVVLKSFEDVF 245


>ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213561, partial [Cucumis
           sativus]
          Length = 764

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 42/105 (40%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
 Frame = -1

Query: 300 GNSDVILGIQWLEKLGAVTTNWKTQVMTFRLNGTPITLKGDPSLERAHVTLKNMWRSIIK 121
           G  D +LG+QWL  LG    +WK   MTF  NG  + +KGDPSL +A V LKNM +S   
Sbjct: 497 GGVDGVLGMQWLYSLGVTEVDWKNLTMTFLHNGKKVKIKGDPSLTKAMVGLKNMIKSWRD 556

Query: 120 EGGGYLIQLNQVEGQSE----TGKFPVAA--PFLQPILNKFQHVF 4
              G+LI+   +E   E     G   V A    +  +L KF+ VF
Sbjct: 557 SDQGFLIECRAMETMYEPPEDNGIEEVLAVDEAVSDVLKKFEDVF 601


Top