BLASTX nr result

ID: Atractylodes21_contig00042930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042930
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518124.1| chromosome transmission fidelity factor, put...    81   1e-13
ref|XP_003535216.1| PREDICTED: chromosome transmission fidelity ...    79   4e-13
ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity ...    75   7e-12
emb|CBI38383.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002299277.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11

>ref|XP_002518124.1| chromosome transmission fidelity factor, putative [Ricinus
           communis] gi|223542720|gb|EEF44257.1| chromosome
           transmission fidelity factor, putative [Ricinus
           communis]
          Length = 813

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 48/108 (44%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
 Frame = -2

Query: 303 NVDDSVED-KRCKFDDSSAIEADDDWLRYSPPP-----QEEAAFIVEEERFISRYAIDIE 142
           N+D    D KR K DD    E D+DWLRYSPPP     + E   +  EE+ IS+Y  +I+
Sbjct: 73  NIDSIASDEKRSKIDDVEQ-EVDEDWLRYSPPPPPPPQEVERMEVAVEEKIISKYISEID 131

Query: 141 GDFMPVTAPD-GDRVYAXXXXXXXXXXXXXXXXKAPSKGLMLEPINVL 1
           GDF+P+TAP  GDRVYA                K+ S GL+ EP+NVL
Sbjct: 132 GDFIPITAPSGGDRVYAKICRVETEERLKKLDMKSQSNGLISEPVNVL 179


>ref|XP_003535216.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
           [Glycine max]
          Length = 966

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/105 (43%), Positives = 58/105 (55%), Gaps = 10/105 (9%)
 Frame = -2

Query: 285 EDKRCKF-----DDSSAIEADDDWLRYSPPPQEEAAFIVEE-----ERFISRYAIDIEGD 136
           E+KR K      +DSSA  AD+DWLRYSPPP  E    VEE     E+ +SRYA +I+G+
Sbjct: 81  EEKRAKVRVAVEEDSSAAAADEDWLRYSPPPVPEGEPAVEEMAFEKEKTLSRYASEIDGE 140

Query: 135 FMPVTAPDGDRVYAXXXXXXXXXXXXXXXXKAPSKGLMLEPINVL 1
            MP+TAP G+RVYA                   S  L  EP+NV+
Sbjct: 141 CMPITAPSGNRVYAKLNRFQGEERVTKLDYNGYSTELSSEPVNVI 185


>ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity protein 18 homolog
           [Vitis vinifera]
          Length = 948

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
 Frame = -2

Query: 336 RPLSPNLLDPGNVDDSVEDKRCKFDDSSAIEADDDWLRYSPPPQEEA---AFIVEEERFI 166
           RPLS    D  +  DS   KR K D S    A++DWLRYS P   +      +V+EER +
Sbjct: 63  RPLS----DGPDAPDS--GKRSKADLSET-GAEEDWLRYSLPQDSDGDLEPMVVDEERIV 115

Query: 165 SRYAIDIEGDFMPVTAPDGDRVYAXXXXXXXXXXXXXXXXKAPSKGLMLEPINVL 1
           SRYA +I+GD +PVT P GDRVY                 +  +KGL+LEPI+VL
Sbjct: 116 SRYASEIDGDCIPVTGPGGDRVYLKISATGSDGRLKKLDLEGRTKGLILEPISVL 170


>emb|CBI38383.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
 Frame = -2

Query: 336 RPLSPNLLDPGNVDDSVEDKRCKFDDSSAIEADDDWLRYSPPPQEEA---AFIVEEERFI 166
           RPLS    D  +  DS   KR K D S    A++DWLRYS P   +      +V+EER +
Sbjct: 63  RPLS----DGPDAPDS--GKRSKADLSET-GAEEDWLRYSLPQDSDGDLEPMVVDEERIV 115

Query: 165 SRYAIDIEGDFMPVTAPDGDRVYAXXXXXXXXXXXXXXXXKAPSKGLMLEPINVL 1
           SRYA +I+GD +PVT P GDRVY                 +  +KGL+LEPI+VL
Sbjct: 116 SRYASEIDGDCIPVTGPGGDRVYLKISATGSDGRLKKLDLEGRTKGLILEPISVL 170


>ref|XP_002299277.1| predicted protein [Populus trichocarpa] gi|222846535|gb|EEE84082.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 49/116 (42%), Positives = 63/116 (54%), Gaps = 12/116 (10%)
 Frame = -2

Query: 312 DPGNVDDSV--EDKRCKFDDSSAIEADD-DWLRYSPP-----PQEEAAFIVEEE---RFI 166
           D  N +D+V  ++KR K DD +  E DD DWLR          +E    +VEEE   + +
Sbjct: 67  DSPNQEDAVLFDEKRSKIDDDTGPEVDDEDWLRQVQDRNGGNEEERVEVVVEEEEKEKIV 126

Query: 165 SRYAIDIEGDFMPVTAPD-GDRVYAXXXXXXXXXXXXXXXXKAPSKGLMLEPINVL 1
           SRY  +I+GDF+PVTAP  GDRVYA                K+ S GL+ EPINVL
Sbjct: 127 SRYVSEIDGDFIPVTAPSGGDRVYAKICRVDTEQGAKKLDFKSQSNGLISEPINVL 182


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