BLASTX nr result

ID: Atractylodes21_contig00042907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042907
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325224.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
gb|AFK41316.1| unknown [Lotus japonicus] gi|388521029|gb|AFK4857...    72   5e-11
ref|XP_002308986.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002524503.1| conserved hypothetical protein [Ricinus comm...    68   7e-10
ref|NP_001237517.1| uncharacterized protein LOC100306355 [Glycin...    67   1e-09

>ref|XP_002325224.1| predicted protein [Populus trichocarpa] gi|222866658|gb|EEF03789.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 53/125 (42%), Positives = 70/125 (56%), Gaps = 13/125 (10%)
 Frame = -1

Query: 518 IAFRLQKQPSTAVTGPSKFSITHHPRP---------CISVDGXXXXXXXXXVHFAADVME 366
           +AFRLQK    +     +F   HH  P         CIS +G         VHFA DV++
Sbjct: 25  LAFRLQKSHLPS----GQFPGDHHQIPQSSQQALRSCISPEGKKKKGKKKRVHFAEDVVD 80

Query: 365 PSGNGEEFRKRLQ----SKNVHKLRTCSSLFKDERGKKKIVMPANRMALYTGILRDRGIQ 198
           P G+GEEFR++ +    S+N     + S+ FK    +++  MPANR ALY GILRDRG+Q
Sbjct: 81  PRGDGEEFRRQHEAVFLSQNSCSSSSTSTEFKKNGQQRR--MPANRAALYNGILRDRGVQ 138

Query: 197 RLAYS 183
           RLAYS
Sbjct: 139 RLAYS 143


>gb|AFK41316.1| unknown [Lotus japonicus] gi|388521029|gb|AFK48576.1| unknown
           [Lotus japonicus]
          Length = 139

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
 Frame = -1

Query: 518 IAFRLQKQPSTAVTGPSKFSITHHP--RPCISVD--GXXXXXXXXXVHFAADVMEPSGNG 351
           +A RLQ++PS   T   + + +  P  R CIS D            VHFA DVM+  G+G
Sbjct: 25  LALRLQQRPSFPQTQFHEIAPSPPPILRSCISSDLKKREQKKKKKRVHFAEDVMDSCGDG 84

Query: 350 EEFRKRLQSKNVHKLRTCSSLFKDERG--KKKIVMPANRMALYTGILRDRGIQRLAYS 183
            EFR+R+    + K+ + S + K+  G  +K  VMPANR ALY GILRDR  QRLAYS
Sbjct: 85  AEFRRRM----ILKINSQSKVQKNCNGGTEKNRVMPANRAALYNGILRDRVAQRLAYS 138


>ref|XP_002308986.1| predicted protein [Populus trichocarpa] gi|222854962|gb|EEE92509.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 12/123 (9%)
 Frame = -1

Query: 518 IAFRLQKQPSTAVTGPSKFSITHHP--------RPCISVDGXXXXXXXXXVHFAADVMEP 363
           +AFRLQK  S   +G     + H          R CIS +G          HFA DV++P
Sbjct: 25  LAFRLQK--SLLPSGQFPIDLHHRIAQSSPQALRSCISSEGKKKGKKKRV-HFAEDVVDP 81

Query: 362 SGNGEEFRKRLQ----SKNVHKLRTCSSLFKDERGKKKIVMPANRMALYTGILRDRGIQR 195
            G+G+EFR++ +    S+N     + S+ FK    +++  MPANR ALY GILRDRG+QR
Sbjct: 82  RGDGQEFRRQHEAIFLSQNSCSSSSTSTEFKKNGQQRR--MPANRAALYNGILRDRGVQR 139

Query: 194 LAY 186
           LAY
Sbjct: 140 LAY 142


>ref|XP_002524503.1| conserved hypothetical protein [Ricinus communis]
           gi|223536291|gb|EEF37943.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 50/122 (40%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
 Frame = -1

Query: 518 IAFRLQKQ-PSTAVTGPSKFSITHHP-----RPCISVDGXXXXXXXXXV--HFAADVMEP 363
           +A RLQK  P + +    +   + H      R CIS +G            HFA DV++P
Sbjct: 25  LALRLQKSLPPSLLPMEQQIPQSSHQQQAVLRSCISSEGKKTNKKKKKKRVHFAEDVVDP 84

Query: 362 SGNGEEFRKRLQSKNVHKLRTCSSLFKDERGK--KKIVMPANRMALYTGILRDRGIQRLA 189
            G+GEEFR++  +  V K  +    FK   G   K   MPANR+ALY GILRDR I RLA
Sbjct: 85  RGDGEEFRRQHGAIVVAKNSSSPPKFKKSSGAGVKAREMPANRVALYHGILRDRVIHRLA 144

Query: 188 YS 183
           YS
Sbjct: 145 YS 146


>ref|NP_001237517.1| uncharacterized protein LOC100306355 [Glycine max]
           gi|255628289|gb|ACU14489.1| unknown [Glycine max]
          Length = 140

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 51/121 (42%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
 Frame = -1

Query: 518 IAFRLQKQPSTAVTGPSKFSITHHPRP--------CISVDGXXXXXXXXXVHFAADVMEP 363
           +A RLQK        P +FS+ H   P        CIS +G         VHFA DV+E 
Sbjct: 25  LALRLQKS-----FPPPQFSVHHQIPPSPSLVLRSCIS-NGKKSKKKKKRVHFAEDVVES 78

Query: 362 SGNGEEFRKR-LQSKNVHKLRTCSSLFKDERGKKKIVMPANRMALYTGILRDRGIQRLAY 186
             +GEEFRKR  +SK +      ++  ++E  K   +MPANR+ALY GILR R  QRLAY
Sbjct: 79  CRDGEEFRKRNSRSKVLKSYYNNNNGEEEEEAKIGGIMPANRVALYNGILRGRVAQRLAY 138

Query: 185 S 183
           S
Sbjct: 139 S 139


Top