BLASTX nr result

ID: Atractylodes21_contig00042896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042896
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    79   4e-13
gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncat...    66   3e-09
gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncat...    66   3e-09
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    65   8e-09

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/89 (39%), Positives = 59/89 (66%)
 Frame = +2

Query: 5   ALGLSVETFSGINIKFGDDHTVVVNQ*CPGLSISLNGCSFVVDALLFDMGTLDMVLGIEL 184
           ALGL +      +IK GD H ++ N  C G+++ + G   +VDAL+ ++G +DMVLG+  
Sbjct: 432 ALGLVITPTVAKSIKLGDGHRLITNGVCKGVNMQMGGIEVIVDALVLELGGMDMVLGVAW 491

Query: 185 VKTLGDVVHNWKERSMRFVYQGNSVSLRG 271
           ++TLG+V+ +WK  +M+F Y+   V+L+G
Sbjct: 492 LRTLGNVIMDWKAMTMQFSYEHELVTLQG 520


>gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/91 (36%), Positives = 51/91 (56%)
 Frame = +2

Query: 2   LALGLSVETFSGINIKFGDDHTVVVNQ*CPGLSISLNGCSFVVDALLFDMGTLDMVLGIE 181
           LALGL +       I+ GD H V     C G+ IS+ G  + +D +LF++   D+VLG+ 
Sbjct: 169 LALGLRITETPVRRIRLGDGHVVPTLGECHGVIISVQGVEWEIDVMLFELRGYDLVLGMA 228

Query: 182 LVKTLGDVVHNWKERSMRFVYQGNSVSLRGV 274
            +  +G    +W E+ MRF YQG  + +RG+
Sbjct: 229 WLTQIGCTCIDWVEKKMRFDYQGEWIEIRGI 259


>gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/91 (36%), Positives = 51/91 (56%)
 Frame = +2

Query: 2   LALGLSVETFSGINIKFGDDHTVVVNQ*CPGLSISLNGCSFVVDALLFDMGTLDMVLGIE 181
           LALGL +       I+ GD H V     C G+ IS+ G  + +D +LF++   D+VLG+ 
Sbjct: 169 LALGLRITETPVRRIRLGDGHVVPTLGECHGVIISVQGVEWEIDVMLFELRGYDLVLGMA 228

Query: 182 LVKTLGDVVHNWKERSMRFVYQGNSVSLRGV 274
            +  +G    +W E+ MRF YQG  + +RG+
Sbjct: 229 WLTQIGCTCIDWVEKKMRFDYQGEWIEIRGI 259


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/79 (37%), Positives = 49/79 (62%)
 Frame = +2

Query: 38  INIKFGDDHTVVVNQ*CPGLSISLNGCSFVVDALLFDMGTLDMVLGIELVKTLGDVVHNW 217
           ++IK GD         C GL + +      +DA LFD+G +DMVLGIE ++TLGD++ NW
Sbjct: 221 MSIKLGDGSYSKTKGTCEGLEVDVGDVHLEIDAQLFDLGGVDMVLGIEWLRTLGDMIVNW 280

Query: 218 KERSMRFVYQGNSVSLRGV 274
            +++M F +    V+++G+
Sbjct: 281 NKQTMSFWHNKKWVTVKGM 299


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