BLASTX nr result

ID: Atractylodes21_contig00042874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042874
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   141   6e-32
emb|CBI20904.3| unnamed protein product [Vitis vinifera]              141   6e-32
ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th...   140   1e-31
ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin...   139   2e-31
ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....   138   4e-31

>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
           vinifera]
          Length = 2181

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/78 (89%), Positives = 74/78 (94%)
 Frame = +3

Query: 3   LMLRRVLSTRKMALLVLPYVSICAEKAEHLEALLGPLDKHVRSYYGSQGGGTLPKDTSVA 182
           LMLRR++ST KMALLVLPYVSICAEKAEHLE LL PL KHVRSYYG+QGGGTLPKDTSVA
Sbjct: 560 LMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGKHVRSYYGNQGGGTLPKDTSVA 619

Query: 183 VCTIEKANSLLNRLLEEG 236
           VCTIEKANSL+NRLLEEG
Sbjct: 620 VCTIEKANSLINRLLEEG 637


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/78 (89%), Positives = 74/78 (94%)
 Frame = +3

Query: 3   LMLRRVLSTRKMALLVLPYVSICAEKAEHLEALLGPLDKHVRSYYGSQGGGTLPKDTSVA 182
           LMLRR++ST KMALLVLPYVSICAEKAEHLE LL PL KHVRSYYG+QGGGTLPKDTSVA
Sbjct: 542 LMLRRLISTGKMALLVLPYVSICAEKAEHLEVLLEPLGKHVRSYYGNQGGGTLPKDTSVA 601

Query: 183 VCTIEKANSLLNRLLEEG 236
           VCTIEKANSL+NRLLEEG
Sbjct: 602 VCTIEKANSLINRLLEEG 619


>ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
           gi|62241195|dbj|BAD93700.1| helicase and polymerase
           containing protein TEBICHI [Arabidopsis thaliana]
           gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit
           [Arabidopsis thaliana]
          Length = 2154

 Score =  140 bits (353), Expect = 1e-31
 Identities = 70/78 (89%), Positives = 73/78 (93%)
 Frame = +3

Query: 3   LMLRRVLSTRKMALLVLPYVSICAEKAEHLEALLGPLDKHVRSYYGSQGGGTLPKDTSVA 182
           LMLRRV+ T KMALLVLPYVSICAEKAEHLE LL PL KHVRSYYG+QGGGTLPKDTSVA
Sbjct: 551 LMLRRVIRTGKMALLVLPYVSICAEKAEHLEVLLEPLGKHVRSYYGNQGGGTLPKDTSVA 610

Query: 183 VCTIEKANSLLNRLLEEG 236
           VCTIEKANSL+NRLLEEG
Sbjct: 611 VCTIEKANSLINRLLEEG 628


>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
          Length = 2147

 Score =  139 bits (351), Expect = 2e-31
 Identities = 70/78 (89%), Positives = 73/78 (93%)
 Frame = +3

Query: 3   LMLRRVLSTRKMALLVLPYVSICAEKAEHLEALLGPLDKHVRSYYGSQGGGTLPKDTSVA 182
           LMLRRV+ T KMALLVLPYVSICAEKAEHLE LL PL KHVRSYYG+QGGGTLPKDTSVA
Sbjct: 525 LMLRRVIITGKMALLVLPYVSICAEKAEHLERLLDPLGKHVRSYYGNQGGGTLPKDTSVA 584

Query: 183 VCTIEKANSLLNRLLEEG 236
           VCTIEKANSL+NRLLEEG
Sbjct: 585 VCTIEKANSLVNRLLEEG 602


>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315090|gb|EFH45513.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score =  138 bits (348), Expect = 4e-31
 Identities = 69/78 (88%), Positives = 73/78 (93%)
 Frame = +3

Query: 3   LMLRRVLSTRKMALLVLPYVSICAEKAEHLEALLGPLDKHVRSYYGSQGGGTLPKDTSVA 182
           LMLRRV++T KMALLVLPYVSICAEKAEHLE LL PL KHVRSYYG+QGGGTLPK TSVA
Sbjct: 550 LMLRRVITTGKMALLVLPYVSICAEKAEHLEVLLEPLGKHVRSYYGNQGGGTLPKGTSVA 609

Query: 183 VCTIEKANSLLNRLLEEG 236
           VCTIEKANSL+NRLLEEG
Sbjct: 610 VCTIEKANSLINRLLEEG 627


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