BLASTX nr result

ID: Atractylodes21_contig00042806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042806
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    83   4e-14
dbj|BAK00361.1| predicted protein [Hordeum vulgare subsp. vulgare]     82   9e-14
ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana] ...    80   2e-13
ref|NP_001174325.1| Os05g0293200 [Oryza sativa Japonica Group] g...    79   8e-13
gb|EAY97389.1| hypothetical protein OsI_19314 [Oryza sativa Indi...    79   8e-13

>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 63/197 (31%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
 Frame = +1

Query: 1   LQLQDTFRNTKKGTMNITDYCHSLKNLADALHDVDSPISDVELVIQILRQLPPSYHSIID 180
           LQL++  R    G +++ DYC  +KNLAD L ++D P++D  LV+ +L  L   + SII+
Sbjct: 116 LQLENELRTMVIGDLSVHDYCKKMKNLADLLANIDFPVTDRALVMHMLNGLSDKFDSIIN 175

Query: 181 VITNTKPFPSFMEARNMMLLHE---SREDNSEHILDSSLNSSTALYSNSTRNDIGXXXXX 351
           VI +  PF SF+E R+M+ L E   S++     +   + +SST LY   T +D       
Sbjct: 176 VIKHKSPFLSFLETRSMLQLEEDRLSKQIKPSDVHHDTSSSSTILY---TISDGSQRPSG 232

Query: 352 XXXXXXXXXXGAPQGGSNCRGFAGSSSSAGNTWGGHPQQFSQHGYNTQLSPLQYQWPFVQ 531
                     G  +GG   RG         N W  + Q  S   YN Q     +  P   
Sbjct: 233 QKYNSGRGNRGRNRGGGRNRG----RGRYNNNW-SYNQFSSPWTYNNQWQHPPFYAPMQP 287

Query: 532 YQRHYGANFAGPTPGSG 582
            Q+H G     PT G G
Sbjct: 288 PQQHTGY----PTFGQG 300


>dbj|BAK00361.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 425

 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
 Frame = +1

Query: 7   LQDTFRNTKKGTMNITDYCHSLKNLADALHDVDSPISDVELVIQILRQLPPSYHSIIDVI 186
           L+  FR   +G +++T YCH LK L+DAL DV +PISD  LV+  LR L   +  I  ++
Sbjct: 137 LEAEFRGLVQGDLSVTAYCHRLKALSDALGDVGTPISDQTLVLNCLRGLNARFSDITTIV 196

Query: 187 TNTKPFPSFMEARNMMLLHESREDNSEHILDSSLNSSTALYSNSTRNDIGXXXXXXXXXX 366
           T   P PSF + R+++ L E++  NS     + +   TALYS S+ +  G          
Sbjct: 197 TMQSPLPSFAQTRSLLTLRETQLANS-----TVVGHQTALYSGSSSHGAG------GYHG 245

Query: 367 XXXXXGAPQGGSNCRG-FAGSSSSAGNTWGGH 459
                GA  GGSN  G   G  + +G  +GG+
Sbjct: 246 AGASYGA--GGSNTSGQNRGDGNRSGVNFGGN 275


>ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177756|dbj|BAB11069.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008231|gb|AED95614.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 369

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 40/87 (45%), Positives = 57/87 (65%)
 Frame = +1

Query: 1   LQLQDTFRNTKKGTMNITDYCHSLKNLADALHDVDSPISDVELVIQILRQLPPSYHSIID 180
           LQ ++  R T    +++ +YC  LK+L+D L +VDSPISD  LV+ +L  L   Y  I++
Sbjct: 117 LQFENELRTTTIDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILN 176

Query: 181 VITNTKPFPSFMEARNMMLLHESREDN 261
           VI +  PFPSF EAR+M+L+ ESR  N
Sbjct: 177 VIKHKSPFPSFTEARSMLLMEESRLSN 203


>ref|NP_001174325.1| Os05g0293200 [Oryza sativa Japonica Group]
           gi|255676213|dbj|BAH93053.1| Os05g0293200 [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 39/87 (44%), Positives = 55/87 (63%)
 Frame = +1

Query: 1   LQLQDTFRNTKKGTMNITDYCHSLKNLADALHDVDSPISDVELVIQILRQLPPSYHSIID 180
           + L   FRN  +G +NITDYC  LK +AD L D+  P +D  LV+Q+L  L P +  +  
Sbjct: 258 INLNAEFRNFTQGDLNITDYCCRLKAMADMLGDLGEPANDRSLVLQLLTGLNPRFGHMQS 317

Query: 181 VITNTKPFPSFMEARNMMLLHESREDN 261
           +IT  KPFPSF++AR+ +LL E  + N
Sbjct: 318 LITMQKPFPSFLDARSQLLLEEITKGN 344


>gb|EAY97389.1| hypothetical protein OsI_19314 [Oryza sativa Indica Group]
           gi|222630983|gb|EEE63115.1| hypothetical protein
           OsJ_17923 [Oryza sativa Japonica Group]
          Length = 262

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 39/87 (44%), Positives = 55/87 (63%)
 Frame = +1

Query: 1   LQLQDTFRNTKKGTMNITDYCHSLKNLADALHDVDSPISDVELVIQILRQLPPSYHSIID 180
           + L   FRN  +G +NITDYC  LK +AD L D+  P +D  LV+Q+L  L P +  +  
Sbjct: 48  INLNAEFRNFTQGDLNITDYCCRLKAMADMLGDLGEPANDRSLVLQLLTGLNPRFGHMQS 107

Query: 181 VITNTKPFPSFMEARNMMLLHESREDN 261
           +IT  KPFPSF++AR+ +LL E  + N
Sbjct: 108 LITMQKPFPSFLDARSQLLLEEITKGN 134


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