BLASTX nr result

ID: Atractylodes21_contig00042754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042754
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   108   6e-26
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...   107   4e-25
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...   100   7e-23
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    82   5e-14
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]    58   9e-07

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  108 bits (271), Expect(2) = 6e-26
 Identities = 51/80 (63%), Positives = 63/80 (78%)
 Frame = +2

Query: 2   TIHLFNLFCQTEDDVSWTSFKRALIERYGGRQTGNPFEELKDLKQTETVEKYITEFEYIS 181
           TIH FNL  +TED++SW + KRALI RYGGR+  NPFEEL  L+Q  +VE+++  FE +S
Sbjct: 117 TIHWFNLLMETEDELSWENLKRALIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLS 176

Query: 182 SQVGRLLEEQYLGYFVGGLK 241
           SQVGRL EEQYLGYF+ GLK
Sbjct: 177 SQVGRLPEEQYLGYFMSGLK 196



 Score = 33.5 bits (75), Expect(2) = 6e-26
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +3

Query: 252 RVHTFNPRNRSQAMKIARDVE 314
           RV T NPRNR + M+IA+DVE
Sbjct: 202 RVRTLNPRNRMEMMRIAKDVE 222


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score =  107 bits (268), Expect(2) = 4e-25
 Identities = 50/80 (62%), Positives = 62/80 (77%)
 Frame = +2

Query: 2   TIHLFNLFCQTEDDVSWTSFKRALIERYGGRQTGNPFEELKDLKQTETVEKYITEFEYIS 181
           TIH FNL  +TED++SW   KRALI RYGGR+  NPFEEL  ++Q  +VE+++  FE +S
Sbjct: 100 TIHWFNLLMETEDELSWEKLKRALIARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLS 159

Query: 182 SQVGRLLEEQYLGYFVGGLK 241
           SQVGRL EEQYLGYF+ GLK
Sbjct: 160 SQVGRLPEEQYLGYFMSGLK 179



 Score = 32.0 bits (71), Expect(2) = 4e-25
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +3

Query: 252 RVHTFNPRNRSQAMKIARDVE 314
           RV T NP NR Q M+IA+DVE
Sbjct: 185 RVRTLNPLNRMQMMRIAKDVE 205


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  100 bits (250), Expect(2) = 7e-23
 Identities = 49/80 (61%), Positives = 60/80 (75%)
 Frame = +2

Query: 2    TIHLFNLFCQTEDDVSWTSFKRALIERYGGRQTGNPFEELKDLKQTETVEKYITEFEYIS 181
            TIH FNL  +TEDD+S    K+ALI RY GR+  NPFEEL  L+Q  +VE+++  FE +S
Sbjct: 790  TIHWFNLLMETEDDLSREKLKKALIARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLS 849

Query: 182  SQVGRLLEEQYLGYFVGGLK 241
            SQVGRL EEQYLGYF+ GLK
Sbjct: 850  SQVGRLPEEQYLGYFMSGLK 869



 Score = 31.2 bits (69), Expect(2) = 7e-23
 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
 Frame = +3

Query: 252  RVHTFNPRNRSQAMKIARDVEA*MSGLLIHRGSGLGNSWG------WKSDRFPDIG-LSN 410
            RV T NP  R Q M+IA+DVE  ++      G   G   G      WK  R    G ++ 
Sbjct: 875  RVRTLNPTTRMQMMRIAKDVEDELNEEDDDGGRPYGKKHGGDRVERWKGVRSIQNGEMAE 934

Query: 411  RRGDGL 428
            RR  GL
Sbjct: 935  RRAKGL 940


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/85 (45%), Positives = 54/85 (63%)
 Frame = +2

Query: 2   TIHLFNLFCQTEDDVSWTSFKRALIERYGGRQTGNPFEELKDLKQTETVEKYITEFEYIS 181
           TIH F    +  + ++W   K AL+ERYGG   GN FE+L  L+Q  T+E+YI +FE + 
Sbjct: 127 TIHFFKGLLEENETLTWEDLKDALLERYGGVSDGNVFEQLSALQQEGTIEEYIADFERLV 186

Query: 182 SQVGRLLEEQYLGYFVGGLKMDTEG 256
           +Q+ +L  +QYLGYFV GLK    G
Sbjct: 187 AQLPKLPNDQYLGYFVHGLKDKIRG 211


>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/67 (46%), Positives = 39/67 (58%)
 Frame = +2

Query: 47  SWTSFKRALIERYGGRQTGNPFEELKDLKQTETVEKYITEFEYISSQVGRLLEEQYLGYF 226
           SW  F RAL  R+G     NP E L  LKQT TVE Y ++FE +S+Q+  L E   L  F
Sbjct: 114 SWEGFVRALQTRFGSSPYENPMEALIRLKQTSTVEDYKSQFEALSNQLRGLAESYKLSCF 173

Query: 227 VGGLKMD 247
           + GL+ D
Sbjct: 174 LSGLRED 180


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