BLASTX nr result

ID: Atractylodes21_contig00042624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042624
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini...   202   3e-50
ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...   192   4e-47
ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucum...   190   1e-46
ref|NP_174061.1| DNA repair metallo-beta-lactamase family protei...   166   2e-39
ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arab...   165   5e-39

>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
           gi|296081253|emb|CBI17997.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score =  202 bits (513), Expect = 3e-50
 Identities = 96/143 (67%), Positives = 115/143 (80%)
 Frame = -1

Query: 434 MERGMISVDRWAAGSQVYFLTHLHADHTSGLSSSWKKGPLYCSRITAKLFPPKFPGFDLS 255
           ME+G+ISVDRW+  SQVYFLTHLH+DHT  LSSSW KGPL+CSR+TAKLFP KFP F+LS
Sbjct: 1   MEKGLISVDRWSDHSQVYFLTHLHSDHTQCLSSSWTKGPLFCSRLTAKLFPFKFPNFNLS 60

Query: 254 LLRILEIGQWCXXXXXXXXXXLETRVEVIAIDANHCPGAVMYLFCGEFGSMLYTGDFRWE 75
           LLRILEIG W            ET V+V+AIDA+HCPGAVMYLF G+FG ML+TGDFRWE
Sbjct: 61  LLRILEIGSWHSVSLVSPSSGSETTVDVMAIDAHHCPGAVMYLFRGDFGCMLFTGDFRWE 120

Query: 74  VTSKVAQIGKNMLLSALKNDKVD 6
            T++ A+IG+ MLL AL+ D+V+
Sbjct: 121 ATNERAKIGRTMLLHALEGDRVN 143


>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score =  192 bits (487), Expect = 4e-47
 Identities = 87/143 (60%), Positives = 112/143 (78%)
 Frame = -1

Query: 434 MERGMISVDRWAAGSQVYFLTHLHADHTSGLSSSWKKGPLYCSRITAKLFPPKFPGFDLS 255
           ME+G++SVD+W  GSQVYFLTHLH+DHT GL+S+W +GPL+CSR+TA LFP +FP F+LS
Sbjct: 1   MEKGLVSVDQWKEGSQVYFLTHLHSDHTKGLTSAWARGPLFCSRLTANLFPARFPEFNLS 60

Query: 254 LLRILEIGQWCXXXXXXXXXXLETRVEVIAIDANHCPGAVMYLFCGEFGSMLYTGDFRWE 75
           LL +L+IG W            +T ++V+ IDA+HCPGAVM LF G+FG +LYTGDFRWE
Sbjct: 61  LLCVLDIGVWHSLSVVSPSSGSQTVLQVMPIDAHHCPGAVMLLFRGDFGCLLYTGDFRWE 120

Query: 74  VTSKVAQIGKNMLLSALKNDKVD 6
            TS+  +IG NMLL+ALK+D VD
Sbjct: 121 ATSERGKIGSNMLLNALKDDSVD 143


>ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
           gi|449493187|ref|XP_004159216.1| PREDICTED: 5'
           exonuclease Apollo-like [Cucumis sativus]
          Length = 428

 Score =  190 bits (482), Expect = 1e-46
 Identities = 88/143 (61%), Positives = 110/143 (76%)
 Frame = -1

Query: 434 MERGMISVDRWAAGSQVYFLTHLHADHTSGLSSSWKKGPLYCSRITAKLFPPKFPGFDLS 255
           ME G+ISVDRW+ GSQ+YFLTHLH+DHT GLSS W KGPL+CSR+TAK FP KFP F+LS
Sbjct: 1   MENGLISVDRWSEGSQIYFLTHLHSDHTKGLSSQWSKGPLFCSRLTAKFFPLKFPSFNLS 60

Query: 254 LLRILEIGQWCXXXXXXXXXXLETRVEVIAIDANHCPGAVMYLFCGEFGSMLYTGDFRWE 75
           LLR+LEIG W               ++V+AIDA+HCPGAVM LF G+FG +LYTGDFRWE
Sbjct: 61  LLRVLEIGLWHSISLVSPSSGSRKVIKVVAIDAHHCPGAVMLLFRGDFGCLLYTGDFRWE 120

Query: 74  VTSKVAQIGKNMLLSALKNDKVD 6
           ++S+ A  G+  LL+AL+++ VD
Sbjct: 121 MSSERANKGRIALLNALEDNTVD 143


>ref|NP_174061.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
           thaliana] gi|9802533|gb|AAF99735.1|AC004557_14 F17L21.20
           [Arabidopsis thaliana] gi|17473671|gb|AAL38292.1|
           unknown protein [Arabidopsis thaliana]
           gi|20148601|gb|AAM10191.1| unknown protein [Arabidopsis
           thaliana] gi|332192705|gb|AEE30826.1| DNA repair
           metallo-beta-lactamase family protein [Arabidopsis
           thaliana]
          Length = 422

 Score =  166 bits (421), Expect = 2e-39
 Identities = 76/143 (53%), Positives = 98/143 (68%)
 Frame = -1

Query: 434 MERGMISVDRWAAGSQVYFLTHLHADHTSGLSSSWKKGPLYCSRITAKLFPPKFPGFDLS 255
           ME G+ISVDRW  GSQ YFLTH+H+DHT GLS  W +GPLYCSR TA LFP +FPGFDLS
Sbjct: 1   MESGLISVDRWRNGSQAYFLTHIHSDHTRGLSGGWSQGPLYCSRTTASLFPSRFPGFDLS 60

Query: 254 LLRILEIGQWCXXXXXXXXXXLETRVEVIAIDANHCPGAVMYLFCGEFGSMLYTGDFRWE 75
           LLR++ +  W              R+ ++AIDA+HCPG++M+LF G+FG  LYTGDFRW+
Sbjct: 61  LLRVVPLFSWTSLSLRSPSSGSTVRLHLMAIDAHHCPGSIMFLFRGDFGCFLYTGDFRWD 120

Query: 74  VTSKVAQIGKNMLLSALKNDKVD 6
             S  +   +  L++A+    VD
Sbjct: 121 --SDASDEARTTLVAAIDEFPVD 141


>ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
           lyrata] gi|297336568|gb|EFH66985.1| hypothetical protein
           ARALYDRAFT_472944 [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score =  165 bits (417), Expect = 5e-39
 Identities = 76/143 (53%), Positives = 97/143 (67%)
 Frame = -1

Query: 434 MERGMISVDRWAAGSQVYFLTHLHADHTSGLSSSWKKGPLYCSRITAKLFPPKFPGFDLS 255
           ME G+ISVDRW  GSQ YFLTH+ +DHT GLS  W KGPLYCSRITA LFP +FPGFDLS
Sbjct: 1   MESGLISVDRWRKGSQAYFLTHMQSDHTRGLSGGWSKGPLYCSRITASLFPSRFPGFDLS 60

Query: 254 LLRILEIGQWCXXXXXXXXXXLETRVEVIAIDANHCPGAVMYLFCGEFGSMLYTGDFRWE 75
           LLR++ +  W              R+  +AIDA+HCPG++M+LF G+FG  LYTGDFRW+
Sbjct: 61  LLRVVPLYSWTSLSLRSPSSGSTVRLHFMAIDAHHCPGSMMFLFRGDFGCFLYTGDFRWD 120

Query: 74  VTSKVAQIGKNMLLSALKNDKVD 6
             +  +   + +L+ A+    VD
Sbjct: 121 --ADASDEARTILVDAIHEFPVD 141


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