BLASTX nr result

ID: Atractylodes21_contig00042578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042578
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like...   171   1e-40
ref|XP_002511433.1| ring finger protein, putative [Ricinus commu...   168   6e-40
ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like...   167   2e-39
emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]   167   2e-39
ref|XP_002298515.1| predicted protein [Populus trichocarpa] gi|2...   166   4e-39

>ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 393

 Score =  171 bits (432), Expect = 1e-40
 Identities = 86/151 (56%), Positives = 107/151 (70%), Gaps = 3/151 (1%)
 Frame = +3

Query: 150 LSQEDGISVQLSAPSEIT---ISPALLWVIVSVAAIFFISGILHVVLRFMKKKQAYPSVS 320
           LS  D    + S PS  +   ISPA+L++IV +A IFFISG+LH+++RF+ K ++  S+S
Sbjct: 33  LSSYDSNYQKESTPSPSSGSRISPAVLFIIVILAVIFFISGLLHLLVRFLVKHRSSSSIS 92

Query: 321 QSNRYSELHRPXXXXXXXXXXXXXXDSGLDQSFIDSLPVFDYKDVSGLKDPFDCAVCLCE 500
           QSNRY E                  DSGLDQ+FID+LPVF YKD+ GLK+PFDCAVCLCE
Sbjct: 93  QSNRYQETSSSHAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKDIVGLKEPFDCAVCLCE 152

Query: 501 FSPHDKLRLIPICSHAFHTHCIDTWLVSNST 593
           FS  DKLRL+P+CSHAFH  CIDTWL+SNST
Sbjct: 153 FSQEDKLRLLPMCSHAFHIECIDTWLLSNST 183


>ref|XP_002511433.1| ring finger protein, putative [Ricinus communis]
           gi|223550548|gb|EEF52035.1| ring finger protein,
           putative [Ricinus communis]
          Length = 354

 Score =  168 bits (426), Expect = 6e-40
 Identities = 77/146 (52%), Positives = 103/146 (70%)
 Frame = +3

Query: 156 QEDGISVQLSAPSEITISPALLWVIVSVAAIFFISGILHVVLRFMKKKQAYPSVSQSNRY 335
           ++D      S+ S   ISP +L VI+ +A IFF+SG+LH+++R + K+  + ++  SNRY
Sbjct: 34  EDDSTLASSSSSSFNRISPVILLVIIILAVIFFVSGVLHLLVRCLLKRSHFSAIFHSNRY 93

Query: 336 SELHRPXXXXXXXXXXXXXXDSGLDQSFIDSLPVFDYKDVSGLKDPFDCAVCLCEFSPHD 515
            E+ R               DSGLDQ+F+D+LPVF YKD+ GLK+PFDCAVCLCEFS  D
Sbjct: 94  PEISRSHSLQRQLQQLFRQHDSGLDQAFVDALPVFYYKDIMGLKEPFDCAVCLCEFSDRD 153

Query: 516 KLRLIPICSHAFHTHCIDTWLVSNST 593
           +LRL+P+CSHAFH HCIDTWL+SNST
Sbjct: 154 RLRLLPMCSHAFHIHCIDTWLLSNST 179


>ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 397

 Score =  167 bits (422), Expect = 2e-39
 Identities = 79/137 (57%), Positives = 102/137 (74%)
 Frame = +3

Query: 183 SAPSEITISPALLWVIVSVAAIFFISGILHVVLRFMKKKQAYPSVSQSNRYSELHRPXXX 362
           S+ S   ISPA+L++IV VA +FFISG+LH+++RF+ +  +  + SQSNRY E+      
Sbjct: 70  SSSSGTRISPAVLFIIVIVAVLFFISGLLHLLVRFLIRHPSSSTSSQSNRYPEISESDAL 129

Query: 363 XXXXXXXXXXXDSGLDQSFIDSLPVFDYKDVSGLKDPFDCAVCLCEFSPHDKLRLIPICS 542
                      DSGLDQ+FID+LPVF YK++ GLK+PFDCAVCLCEFS  DKLRL+P+CS
Sbjct: 130 QRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPVCS 189

Query: 543 HAFHTHCIDTWLVSNST 593
           HAFH +CIDTWL+SNST
Sbjct: 190 HAFHINCIDTWLLSNST 206


>emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]
          Length = 1090

 Score =  167 bits (422), Expect = 2e-39
 Identities = 79/137 (57%), Positives = 102/137 (74%)
 Frame = +3

Query: 183  SAPSEITISPALLWVIVSVAAIFFISGILHVVLRFMKKKQAYPSVSQSNRYSELHRPXXX 362
            S+ S   ISPA+L++IV VA +FFISG+LH+++RF+ +  +  + SQSNRY E+      
Sbjct: 763  SSSSGTRISPAVLFIIVIVAVLFFISGLLHLLVRFLIRHPSSSTSSQSNRYPEISESDAL 822

Query: 363  XXXXXXXXXXXDSGLDQSFIDSLPVFDYKDVSGLKDPFDCAVCLCEFSPHDKLRLIPICS 542
                       DSGLDQ+FID+LPVF YK++ GLK+PFDCAVCLCEFS  DKLRL+P+CS
Sbjct: 823  QRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPVCS 882

Query: 543  HAFHTHCIDTWLVSNST 593
            HAFH +CIDTWL+SNST
Sbjct: 883  HAFHINCIDTWLLSNST 899


>ref|XP_002298515.1| predicted protein [Populus trichocarpa] gi|222845773|gb|EEE83320.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score =  166 bits (419), Expect = 4e-39
 Identities = 79/137 (57%), Positives = 99/137 (72%)
 Frame = +3

Query: 183 SAPSEITISPALLWVIVSVAAIFFISGILHVVLRFMKKKQAYPSVSQSNRYSELHRPXXX 362
           S PS   ISPA+L+VIV +A +FFISG+LH+++RF+ K     + SQSNRY E+      
Sbjct: 5   SPPSASLISPAVLFVIVILAVLFFISGLLHLLIRFLIKHPTSSAASQSNRYPEISGSDAL 64

Query: 363 XXXXXXXXXXXDSGLDQSFIDSLPVFDYKDVSGLKDPFDCAVCLCEFSPHDKLRLIPICS 542
                      DSGLDQ+FID+LPVF YK++ G K+PFDC VCLCEFS  DKLRL+P+CS
Sbjct: 65  QRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGPKEPFDCPVCLCEFSEKDKLRLLPMCS 124

Query: 543 HAFHTHCIDTWLVSNST 593
           HAFH +CIDTWL+SNST
Sbjct: 125 HAFHINCIDTWLLSNST 141


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