BLASTX nr result

ID: Atractylodes21_contig00042509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042509
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29641.3| unnamed protein product [Vitis vinifera]               78   6e-13
ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, pu...    77   2e-12
ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247...    75   6e-12
gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japo...    75   7e-12
gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indi...    75   7e-12

>emb|CBI29641.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 42/75 (56%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
 Frame = -3

Query: 224 LKLKQEGAEEGTNEDDEWEYVEEGPPEIIWQGNEIIXXXXXXXXXXKDASQYIEK-EDPN 48
           L+ K+   E   NEDD+WEY E GP EIIWQGNEII          KD  Q+  K ED  
Sbjct: 98  LEKKEVEKENELNEDDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKKDVDQHSRKEEDTE 156

Query: 47  RPTSNPLPPQSEAYA 3
           RPTSNPLPPQSEA++
Sbjct: 157 RPTSNPLPPQSEAFS 171


>ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
           communis] gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary
           factor, small subunit, putative [Ricinus communis]
          Length = 857

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/66 (62%), Positives = 45/66 (68%)
 Frame = -3

Query: 200 EEGTNEDDEWEYVEEGPPEIIWQGNEIIXXXXXXXXXXKDASQYIEKEDPNRPTSNPLPP 21
           E   N+DD+WEYVEEGP EIIWQGNEII          K A Q    ED +RPTSNPLPP
Sbjct: 125 ENEFNDDDDWEYVEEGPAEIIWQGNEII-VRKKKIPKKKSADQQSRNED-DRPTSNPLPP 182

Query: 20  QSEAYA 3
           QSEA+A
Sbjct: 183 QSEAFA 188


>ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
          Length = 887

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/83 (50%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
 Frame = -3

Query: 224 LKLKQEGAEEGTNEDDEWEYVEEGPPEIIWQGNEIIXXXXXXXXXXKDASQYIEKE---- 57
           L+ K+   E   NEDD+WEY E GP EIIWQGNEII          KD  Q+  KE    
Sbjct: 93  LEKKEVEKENELNEDDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKKDVDQHSRKEVLLR 151

Query: 56  -----DPNRPTSNPLPPQSEAYA 3
                D  RPTSNPLPPQSEA++
Sbjct: 152 LFQLYDTERPTSNPLPPQSEAFS 174


>gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japonica Group]
          Length = 635

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = -3

Query: 194 GTNEDDEWEYVEEGPPEIIWQGNEI-IXXXXXXXXXXKDASQYIEKEDPNRPTSNPLPPQ 18
           GT EDDEWEYVE+GP EIIW+GNEI +             +Q I++ED  RPTSNPLPPQ
Sbjct: 23  GTEEDDEWEYVEDGPAEIIWEGNEITVKKKMVKVPKKAKENQPIQQED--RPTSNPLPPQ 80

Query: 17  SEAYA 3
           S A+A
Sbjct: 81  SVAFA 85


>gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indica Group]
          Length = 731

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = -3

Query: 194 GTNEDDEWEYVEEGPPEIIWQGNEI-IXXXXXXXXXXKDASQYIEKEDPNRPTSNPLPPQ 18
           GT EDDEWEYVE+GP EIIW+GNEI +             +Q I++ED  RPTSNPLPPQ
Sbjct: 119 GTEEDDEWEYVEDGPAEIIWEGNEITVKKKMVKVPKKAKENQPIQQED--RPTSNPLPPQ 176

Query: 17  SEAYA 3
           S A+A
Sbjct: 177 SVAFA 181


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