BLASTX nr result

ID: Atractylodes21_contig00042488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042488
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14898.3| unnamed protein product [Vitis vinifera]              124   1e-26
emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]   121   5e-26
ref|XP_002511274.1| replication factor C / DNA polymerase III ga...   116   2e-24
ref|XP_003549834.1| PREDICTED: uncharacterized protein LOC100808...   109   2e-22
ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22

>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  124 bits (310), Expect = 1e-26
 Identities = 67/88 (76%), Positives = 72/88 (81%), Gaps = 2/88 (2%)
 Frame = -3

Query: 292 LIMDILAGKFQESASEVKRQFFERHTSEADLQQLNNALKILSETEKQLRASKNQTTWLTV 113
           LIMDILAGK QE  SEV+R FFE HTSE DLQ+L++ALKILSETEKQLRASKNQTTWLTV
Sbjct: 436 LIMDILAGKCQEGTSEVRRNFFEGHTSEVDLQKLSHALKILSETEKQLRASKNQTTWLTV 495

Query: 112 ALLQLSSAPS--FNANDSSLCARTAHPR 35
           ALLQLSS  S   +ANDS    RT HPR
Sbjct: 496 ALLQLSSVESSFLDANDSRAFLRTEHPR 523


>emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]
          Length = 1057

 Score =  121 bits (304), Expect = 5e-26
 Identities = 66/88 (75%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
 Frame = -3

Query: 292 LIMDILAGKFQESASEVKRQFFERHTSEADLQQLNNALKILSETEKQLRASKNQTTWLTV 113
           LIMDILAGK QE  SEV+  FFE HTSE DLQ+L++ALKILSETEKQLRASKNQTTWLTV
Sbjct: 618 LIMDILAGKCQEGTSEVRXNFFEGHTSEVDLQKLSHALKILSETEKQLRASKNQTTWLTV 677

Query: 112 ALLQLSSAPS--FNANDSSLCARTAHPR 35
           ALLQLSS  S   +ANDS    RT HPR
Sbjct: 678 ALLQLSSVESSFLDANDSRAFLRTEHPR 705


>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223550389|gb|EEF51876.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1025

 Score =  116 bits (291), Expect = 2e-24
 Identities = 63/98 (64%), Positives = 77/98 (78%), Gaps = 2/98 (2%)
 Frame = -3

Query: 292 LIMDILAGKFQESASEVKRQFFERHTSEADLQQLNNALKILSETEKQLRASKNQTTWLTV 113
           +IMD+LAGK QE +SEV+R+F  RH +EAD+Q+L++ALK+LSETEKQLR SK+Q+TWLTV
Sbjct: 576 IIMDMLAGKCQEDSSEVRRKFSSRHATEADMQRLSHALKVLSETEKQLRMSKSQSTWLTV 635

Query: 112 ALLQLSS--APSFNANDSSLCARTAHPRDSGGFCCLSS 5
           ALLQLSS  AP  NAND +   R A  RD G FC  SS
Sbjct: 636 ALLQLSSLEAPFLNANDPNPSIRNAQDRD-GDFCSTSS 672


>ref|XP_003549834.1| PREDICTED: uncharacterized protein LOC100808544 [Glycine max]
          Length = 976

 Score =  109 bits (273), Expect = 2e-22
 Identities = 63/97 (64%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
 Frame = -3

Query: 292 LIMDILAGKFQESASEVKRQFFERHTSEADLQQLNNALKILSETEKQLRASKNQTTWLTV 113
           LIMDILAGKF+   SE++R F  R+TSEADLQ+L+ AL+ILSETEKQLR SKNQTTW T 
Sbjct: 574 LIMDILAGKFELGDSEIRR-FCNRYTSEADLQKLSRALRILSETEKQLRISKNQTTWFTA 632

Query: 112 ALLQLSSA--PSFNANDSSLCARTAHPRDSGGFCCLS 8
           ALLQLSS    S + ND+ LCAR+A  RD G  C  S
Sbjct: 633 ALLQLSSVEYSSADTNDTKLCARSASNRD-GDICSTS 668


>ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|222858771|gb|EEE96318.1|
           predicted protein [Populus trichocarpa]
          Length = 965

 Score =  108 bits (270), Expect = 5e-22
 Identities = 56/89 (62%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
 Frame = -3

Query: 292 LIMDILAGKFQESASEVKRQFFERHTSEADLQQLNNALKILSETEKQLRASKNQTTWLTV 113
           LIMD+LAGK Q+++SEV+R+F  +H SE D+Q+L++ALKILSE+EKQLR SKNQ+TWLTV
Sbjct: 574 LIMDVLAGKCQDNSSEVRRKFSRKHASEGDMQRLSHALKILSESEKQLRMSKNQSTWLTV 633

Query: 112 ALLQLSS--APSFNANDSSLCARTAHPRD 32
           ALLQLSS  A   + NDS    R  H RD
Sbjct: 634 ALLQLSSLEASPMDVNDSKSSMRNGHDRD 662


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