BLASTX nr result

ID: Atractylodes21_contig00042452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042452
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18125.3| unnamed protein product [Vitis vinifera]               92   7e-17
ref|XP_002323604.1| GRAS family transcription factor [Populus tr...    86   3e-15
ref|XP_003552270.1| PREDICTED: nodulation-signaling pathway 2 pr...    79   5e-13
ref|XP_003530301.1| PREDICTED: nodulation-signaling pathway 2 pr...    70   3e-10
ref|XP_002313234.1| GRAS family transcription factor [Populus tr...    67   3e-09

>emb|CBI18125.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score = 91.7 bits (226), Expect = 7e-17
 Identities = 80/217 (36%), Positives = 106/217 (48%), Gaps = 32/217 (14%)
 Frame = -2

Query: 560 LDQDCLNMDFHTSEDRDYPSPVTTTTEHSS--------PILCLSNSDMFPG-------DH 426
           +D+D    +F +S          TTTE SS        P +  S    FPG         
Sbjct: 119 IDEDVCGYEFSSS---------ITTTEDSSGIPSAPDFPTVISSEFVGFPGCDEALQTSF 169

Query: 425 MQNHSPVNMEGFE--------DVCRWLCEDDQQMEEIP-RDGSSEGSYVLSPSVSMNSSE 273
           +    P+NME FE        D   WL   D   E  P +  S+EG    SP  S  SSE
Sbjct: 170 LIGDLPLNMEEFETILCGEIGDAYGWL---DGSEESFPSQQQSTEGEDEWSPCPSTKSSE 226

Query: 272 ACPYVSYERQSF------MEIESETGIQNLLEAYADATGLGQRELANVIQKCISEKASPI 111
           A    +  +QS       +EI+++  I +LL+AY +A    QREL+ VI + I EK +P+
Sbjct: 227 ALIDTTSTQQSLTFPAEGVEIDNQQSILHLLKAYGEAVEENQRELSEVILRSICEKGNPL 286

Query: 110 GPALERLALNLFR-CEGQ-EYLKQESMRSFKPAFRAF 6
           G  LERLA NLF   E Q +YLKQESM++F  AF+AF
Sbjct: 287 GETLERLAFNLFEDIERQDDYLKQESMQNFAAAFKAF 323


>ref|XP_002323604.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222868234|gb|EEF05365.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 535

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 61/148 (41%), Positives = 85/148 (57%), Gaps = 16/148 (10%)
 Frame = -2

Query: 401 MEGFE-----DVCRWLCEDDQQMEEIPRDGSSEGSYVLSPSVSMNSSEACPYVSYERQSF 237
           M+GFE     ++    CE +       R+ SSEG  V SP+ S+ SSEA    +   QS 
Sbjct: 89  MKGFEPNLIKEMELIFCESEGNSSS--RELSSEGENVWSPNPSIKSSEASMDTTPIPQST 146

Query: 236 MEI-------ESETGIQNLLEAYADATGLGQRELANVIQKCISEKASPIGPALERLALNL 78
           +E+       E++  + +LL+AY +A   GQ ELA+VI +C+SEK SP G A E LA NL
Sbjct: 147 LELPGEELQLENQVSLFHLLKAYGEAMDGGQSELADVIMRCVSEKVSPAGEAFECLAFNL 206

Query: 77  FRCEGQE----YLKQESMRSFKPAFRAF 6
             C+  E    Y+K+ES R+F+ AFRAF
Sbjct: 207 --CQDLEKQGDYIKRESCRNFEAAFRAF 232


>ref|XP_003552270.1| PREDICTED: nodulation-signaling pathway 2 protein-like [Glycine
           max]
          Length = 497

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 24/185 (12%)
 Frame = -2

Query: 491 TTTEHSSPILC---LSNSDMFPGDHMQNHSPVNMEGFEDVCRWLCED-----DQQMEEIP 336
           +T E S+  +C     +S +F  DH+    P+N E          +D     D Q+  I 
Sbjct: 15  STPEDSTSEICSIPFPSSPIFSIDHIHIQYPINEETMHLPSLMELDDFDSILDTQIISIQ 74

Query: 335 RDGSSEGSYVLSPSVSM---NSSEACPYVSYERQSF-----------MEIESETGIQNLL 198
             G SEGS+  S + S    N+    P V  E  +            ME+E++  + +LL
Sbjct: 75  GHGESEGSFFPSQNFSSEVENAWSPTPSVRSELSTNQTSPLTLPLENMEVENQVSLPHLL 134

Query: 197 EAYADATGLGQRELANVIQKCISEKASPIGPALERLALNLFR--CEGQEYLKQESMRSFK 24
           +AY +A   GQ+ L  VI +CIS+KASP+G +LERLA  L +      +YLK E++++F+
Sbjct: 135 KAYGEALEQGQKALEEVILRCISQKASPLGESLERLAFYLSQGMTNHGDYLKGEALKNFE 194

Query: 23  PAFRA 9
            A RA
Sbjct: 195 AALRA 199


>ref|XP_003530301.1| PREDICTED: nodulation-signaling pathway 2 protein-like [Glycine
           max]
          Length = 558

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 24/189 (12%)
 Frame = -2

Query: 503 SPVTTTTEHSSPILC---LSNSDMFPGDHMQNHSPVNMEGFEDVCRWLCED-----DQQM 348
           S + +T   S+  +C     +S MF  DH+    P+N E  +       +D     D Q+
Sbjct: 71  STLLSTPGDSTSEICSIPFPSSPMFSNDHIHIQYPINEETMDLPSLMELDDFYSILDTQI 130

Query: 347 EEIPRDGSSEGSYVLSPSVSM---NSSEACPYVSYERQSF-----------MEIESETGI 210
             I   G SEGS+  S ++S    N+    P V  E  +            MEIE +  +
Sbjct: 131 ISIQGHGESEGSFFPSQNLSSEVENAWSPTPSVMSELSTNQTSPLTLPLENMEIEKQVSL 190

Query: 209 QNLLEAYADATGLGQRELANVIQKCISEKASPIGPALERLALNLFR--CEGQEYLKQESM 36
            +LL+AY +A   GQ+ L  V  + IS+KASP+G +LER A  L +      +YLK E+ 
Sbjct: 191 PHLLKAYGEALEQGQKALEEVTLRRISQKASPLGESLERFAFYLSQGMTNHGDYLKGEAF 250

Query: 35  RSFKPAFRA 9
           ++F    RA
Sbjct: 251 KNFGITLRA 259


>ref|XP_002313234.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222849642|gb|EEE87189.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 537

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 48/151 (31%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
 Frame = -2

Query: 443 MFPGDHMQNHSPVNMEGFEDVCRWLCEDDQ-QMEEIPRDGSSEGSYVLSPSVSMNSSEAC 267
           + P  ++    P+ +   ED+  WL  +++  M+  P  G   GS ++SP     S +  
Sbjct: 84  LIPESNITFDDPLTVREIEDINDWLASENRGAMQNFP--GDDAGSLLVSPPSREASIDTL 141

Query: 266 P-YVSYERQSF-MEIESETGIQNLLEAYADATGLGQRELANVIQKCISEKASPIGPALER 93
               S     F ME +++  I +LL+AY +A  +  +ELA  I   + E A PIG  LER
Sbjct: 142 TNQTSLVLPGFGMEFDNQLMILHLLKAYGEAAEMEMKELAEKIMSRLKEMACPIGSTLER 201

Query: 92  LALNLFRC-EGQ-EYLKQESMRSFKPAFRAF 6
           LA  L +  EG+ ++L QE+ ++++ AF+AF
Sbjct: 202 LAYYLIQAREGEVDFLWQEASKNYEAAFKAF 232


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