BLASTX nr result

ID: Atractylodes21_contig00042442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042442
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19874.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig...   115   5e-24
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]   115   5e-24
ref|XP_002300701.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
gb|ACL14424.1| putative E3 ubiquitin ligase [Lotus japonicus]         107   1e-21

>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
          Length = 1510

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/87 (66%), Positives = 70/87 (80%)
 Frame = +2

Query: 257 IIMSGSSTFPMEPDDIVRSLINIVGSFIQERLLDQRKRASQKEQCSERLAAEDESNNKDT 436
           I M+G+  F M+  DIVR L+  VGSFIQ++L+++ +RA  KEQC+ERLAAED S  KDT
Sbjct: 15  ITMAGNYRFAMDQKDIVRFLVTTVGSFIQDQLINKEQRAQHKEQCAERLAAEDGSCEKDT 74

Query: 437 GFRYSDQAVLANLDWGMDALEEAINTS 517
             RYSDQAVLANLDWG+DALEEAINTS
Sbjct: 75  EVRYSDQAVLANLDWGIDALEEAINTS 101


>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1494

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/85 (67%), Positives = 69/85 (81%)
 Frame = +2

Query: 263 MSGSSTFPMEPDDIVRSLINIVGSFIQERLLDQRKRASQKEQCSERLAAEDESNNKDTGF 442
           M+G+  F M+  DIVR L+  VGSFIQ++L+++ +RA  KEQC+ERLAAED S  KDT  
Sbjct: 1   MAGNYRFAMDQKDIVRFLVTTVGSFIQDQLINKEQRAQHKEQCAERLAAEDGSCEKDTEV 60

Query: 443 RYSDQAVLANLDWGMDALEEAINTS 517
           RYSDQAVLANLDWG+DALEEAINTS
Sbjct: 61  RYSDQAVLANLDWGIDALEEAINTS 85


>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
          Length = 1494

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/85 (67%), Positives = 69/85 (81%)
 Frame = +2

Query: 263 MSGSSTFPMEPDDIVRSLINIVGSFIQERLLDQRKRASQKEQCSERLAAEDESNNKDTGF 442
           M+G+  F M+  DIVR L+  VGSFIQ++L+++ +RA  KEQC+ERLAAED S  KDT  
Sbjct: 1   MAGNYRFAMDQKDIVRFLVTTVGSFIQDQLINKEQRAQHKEQCAERLAAEDGSCEKDTEV 60

Query: 443 RYSDQAVLANLDWGMDALEEAINTS 517
           RYSDQAVLANLDWG+DALEEAINTS
Sbjct: 61  RYSDQAVLANLDWGIDALEEAINTS 85


>ref|XP_002300701.1| predicted protein [Populus trichocarpa] gi|222842427|gb|EEE79974.1|
           predicted protein [Populus trichocarpa]
          Length = 1518

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = +2

Query: 263 MSGSSTFPMEPDDIVRSLINIVGSFIQERLLDQRKRASQKEQCSERLAAEDESNNKDTGF 442
           M+GS  F M+  DIV  LI  VGSFIQ+RL+ + +R   KEQC+ERLAAED S +KDT  
Sbjct: 1   MAGSYGFAMDQKDIVSLLITTVGSFIQDRLVSKEQRTQHKEQCAERLAAEDGSCDKDTEV 60

Query: 443 RYSDQAVLANLDWGMDALEEAINTS 517
            YSDQAVLANLDWG++ALEEAI+TS
Sbjct: 61  LYSDQAVLANLDWGIEALEEAIDTS 85


>gb|ACL14424.1| putative E3 ubiquitin ligase [Lotus japonicus]
          Length = 1485

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/84 (63%), Positives = 65/84 (77%)
 Frame = +2

Query: 263 MSGSSTFPMEPDDIVRSLINIVGSFIQERLLDQRKRASQKEQCSERLAAEDESNNKDTGF 442
           M+G+  F M+  DIVR L   V SFIQ+RL+++ +R   KEQC+ERLAAED S +KDT  
Sbjct: 1   MAGNFRFMMDQKDIVRFLTTTVDSFIQDRLINKEQRTQHKEQCAERLAAEDGSGDKDTEV 60

Query: 443 RYSDQAVLANLDWGMDALEEAINT 514
            YSDQAVLANLDWG++ALEEAINT
Sbjct: 61  EYSDQAVLANLDWGIEALEEAINT 84


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