BLASTX nr result

ID: Atractylodes21_contig00042428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042428
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...    73   3e-11
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...    73   3e-11
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]      73   3e-11
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...    72   4e-11
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]      72   4e-11

>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/80 (46%), Positives = 54/80 (67%)
 Frame = +3

Query: 3   NASAEVRSVYDKYQKDAVDVACVMLTSMTDELLRDHEDMNALGIITSLRTMFIKQAKLER 182
           NA A  R  ++K   D +D++C+ML +M+ EL R +E ++A  IIT LR MF  QA+ ER
Sbjct: 135 NALAAQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAER 194

Query: 183 FDTVKTLFASKMQEGSSVGP 242
           F+T K+LFA ++ EG+ V P
Sbjct: 195 FNTSKSLFACRLAEGNPVSP 214


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/80 (46%), Positives = 54/80 (67%)
 Frame = +3

Query: 3   NASAEVRSVYDKYQKDAVDVACVMLTSMTDELLRDHEDMNALGIITSLRTMFIKQAKLER 182
           NA A  R  ++K   D +D++C+ML +M+ EL R +E ++A  IIT LR MF  QA+ ER
Sbjct: 123 NAPAAQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAER 182

Query: 183 FDTVKTLFASKMQEGSSVGP 242
           F+T K+LFA ++ EG+ V P
Sbjct: 183 FNTSKSLFACRLAEGNLVSP 202


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/80 (46%), Positives = 54/80 (67%)
 Frame = +3

Query: 3   NASAEVRSVYDKYQKDAVDVACVMLTSMTDELLRDHEDMNALGIITSLRTMFIKQAKLER 182
           NA A  R  ++K   D +D++C+ML +M+ EL R +E ++A  IIT LR MF  QA+ ER
Sbjct: 56  NAPAAQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAER 115

Query: 183 FDTVKTLFASKMQEGSSVGP 242
           F+T K+LFA ++ EG+ V P
Sbjct: 116 FNTSKSLFACRLAEGNLVSP 135


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/80 (45%), Positives = 55/80 (68%)
 Frame = +3

Query: 3   NASAEVRSVYDKYQKDAVDVACVMLTSMTDELLRDHEDMNALGIITSLRTMFIKQAKLER 182
           NA A  R  +++  K+ +D++C+ML +M+ EL R +E ++A  IIT LR MF  QA+ ER
Sbjct: 148 NAPAAQRREHERRCKEYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAER 207

Query: 183 FDTVKTLFASKMQEGSSVGP 242
           F+T K+LFA ++ EG+ V P
Sbjct: 208 FNTSKSLFACRLAEGNPVSP 227


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/80 (45%), Positives = 55/80 (68%)
 Frame = +3

Query: 3   NASAEVRSVYDKYQKDAVDVACVMLTSMTDELLRDHEDMNALGIITSLRTMFIKQAKLER 182
           NA A  R  +++  K+ +D++C+ML +M+ EL R +E ++A  IIT LR MF  QA+ ER
Sbjct: 148 NAPAAQRREHERRCKEYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAER 207

Query: 183 FDTVKTLFASKMQEGSSVGP 242
           F+T K+LFA ++ EG+ V P
Sbjct: 208 FNTSKSLFACRLAEGNPVSP 227


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