BLASTX nr result

ID: Atractylodes21_contig00042347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042347
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883844.1| hypothetical protein ARALYDRAFT_319455 [Arab...   205   4e-51
ref|NP_565364.1| uncharacterized protein [Arabidopsis thaliana] ...   196   1e-48
ref|XP_002313921.1| predicted protein [Populus trichocarpa] gi|2...   194   6e-48
gb|AAM64455.1| unknown [Arabidopsis thaliana]                         192   2e-47
ref|XP_002276295.1| PREDICTED: thymocyte nuclear protein 1-like ...   192   3e-47

>ref|XP_002883844.1| hypothetical protein ARALYDRAFT_319455 [Arabidopsis lyrata subsp.
           lyrata] gi|297329684|gb|EFH60103.1| hypothetical protein
           ARALYDRAFT_319455 [Arabidopsis lyrata subsp. lyrata]
          Length = 155

 Score =  205 bits (521), Expect = 4e-51
 Identities = 101/150 (67%), Positives = 111/150 (74%), Gaps = 2/150 (1%)
 Frame = +3

Query: 24  KQYWLLKTEPGEWSWEDQASNGGLSKWDGVKNHQALKHLKSARLHDLCFFYHSGTKSXXX 203
           KQYWLLKTEP EWSW DQ +NGG+SKWDGVKN QA K+LKS  L DLCFFYHSGTK+   
Sbjct: 5   KQYWLLKTEPSEWSWSDQEANGGISKWDGVKNKQAQKNLKSMTLGDLCFFYHSGTKARCV 64

Query: 204 XXXXXXXXEWYQDDVTGGGAIDVKAVGEMRRPVDLKEMKGELKNNKEFGLFRQPRLSVVR 383
                   EWY DD  G GA+DVKA+GEMR+ VDLKEMKG+    K F LFRQPRLSVV 
Sbjct: 65  VGVVEVSREWYTDDDEGEGAVDVKAIGEMRKCVDLKEMKGDKGIIKSFVLFRQPRLSVVP 124

Query: 384 VPIDVWQKICELGNGYEGDGA--CVSEDDE 467
           V  DVW+KICELGNG+ GDG   C S DDE
Sbjct: 125 VEEDVWKKICELGNGFCGDGKEDCESSDDE 154


>ref|NP_565364.1| uncharacterized protein [Arabidopsis thaliana]
           gi|3810594|gb|AAC69376.1| expressed protein [Arabidopsis
           thaliana] gi|149944293|gb|ABR46189.1| At2g14660
           [Arabidopsis thaliana] gi|330251223|gb|AEC06317.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 158

 Score =  196 bits (499), Expect = 1e-48
 Identities = 105/161 (65%), Positives = 113/161 (70%), Gaps = 6/161 (3%)
 Frame = +3

Query: 3   GKSKRDEKQYWLLKTEPGEWSWEDQASNGGLSKWDGVKNHQALKHLKSARLHDLCFFYHS 182
           GK+KR    YWLLKTEP EWSW DQ SNGG+SKWDGVKN QA K+LKS  L DLCFFYHS
Sbjct: 2   GKTKR----YWLLKTEPNEWSWSDQESNGGISKWDGVKNKQAQKNLKSMTLGDLCFFYHS 57

Query: 183 GTKSXXXXXXXXXXXEWYQDD---VTGGGAIDVKAVGEMRRPVDLKEMKGELK-NNKEFG 350
           GTKS           EWY DD   V G GA+DVKA+GEMR+ VDLKEMKG+     K F 
Sbjct: 58  GTKSRCVVGVVEVSREWYTDDAEGVEGEGAVDVKAIGEMRKCVDLKEMKGDKGIITKGFV 117

Query: 351 LFRQPRLSVVRVPIDVWQKICELGNGYEGDGA--CVSEDDE 467
           LFRQPRLSVV V  DVW  ICELGNG+ GDG   C S DDE
Sbjct: 118 LFRQPRLSVVPVEEDVWNMICELGNGFCGDGKEDCESSDDE 158


>ref|XP_002313921.1| predicted protein [Populus trichocarpa] gi|222850329|gb|EEE87876.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  194 bits (493), Expect = 6e-48
 Identities = 93/148 (62%), Positives = 112/148 (75%)
 Frame = +3

Query: 21  EKQYWLLKTEPGEWSWEDQASNGGLSKWDGVKNHQALKHLKSARLHDLCFFYHSGTKSXX 200
           EK+YWLLKTEPGEWSW+DQASNGG+S WDGVKN QA K+LK+ +L+DLCFFYHSG+ +  
Sbjct: 4   EKRYWLLKTEPGEWSWDDQASNGGISNWDGVKNKQAQKNLKAMKLNDLCFFYHSGSNARR 63

Query: 201 XXXXXXXXXEWYQDDVTGGGAIDVKAVGEMRRPVDLKEMKGELKNNKEFGLFRQPRLSVV 380
                    EWY  D  G G +DVKAVGEMRRP+DLKE+KG+ +  K F LFRQPRLSVV
Sbjct: 64  VVGVVTVVREWY--DEGGEGVVDVKAVGEMRRPLDLKELKGD-EGLKGFQLFRQPRLSVV 120

Query: 381 RVPIDVWQKICELGNGYEGDGACVSEDD 464
            V  +VW+++CELG G+EGDG     DD
Sbjct: 121 PVSKEVWERVCELGGGFEGDGKDDGGDD 148


>gb|AAM64455.1| unknown [Arabidopsis thaliana]
          Length = 158

 Score =  192 bits (489), Expect = 2e-47
 Identities = 104/161 (64%), Positives = 113/161 (70%), Gaps = 6/161 (3%)
 Frame = +3

Query: 3   GKSKRDEKQYWLLKTEPGEWSWEDQASNGGLSKWDGVKNHQALKHLKSARLHDLCFFYHS 182
           GKSKR    YWLLKTEP EWS  DQ SNGG+SKWDGVKN QA K+LKS  L DLCFFYHS
Sbjct: 2   GKSKR----YWLLKTEPSEWSLSDQESNGGISKWDGVKNKQAQKNLKSMTLGDLCFFYHS 57

Query: 183 GTKSXXXXXXXXXXXEWYQDD---VTGGGAIDVKAVGEMRRPVDLKEMKGELK-NNKEFG 350
           GTK+           EWY  D   V G GA+DVKA+GEMR+ VDLKEMKG+   + K F 
Sbjct: 58  GTKARSVVGLVEVSREWYTGDDEGVEGEGAVDVKAIGEMRKCVDLKEMKGDKGISTKGFV 117

Query: 351 LFRQPRLSVVRVPIDVWQKICELGNGYEGDGA--CVSEDDE 467
           LFRQPRLSVV V  DVW KICELGNG+ GDG   C S DDE
Sbjct: 118 LFRQPRLSVVPVEEDVWNKICELGNGFCGDGKEDCESSDDE 158


>ref|XP_002276295.1| PREDICTED: thymocyte nuclear protein 1-like [Vitis vinifera]
          Length = 158

 Score =  192 bits (487), Expect = 3e-47
 Identities = 93/142 (65%), Positives = 106/142 (74%), Gaps = 1/142 (0%)
 Frame = +3

Query: 21  EKQYWLLKTEPGEWSWEDQASNGGLSKWDGVKNHQALKHLKSARLHDLCFFYHSGTKSXX 200
           EK YWLLKTEPGEWSWEDQA+N GLS WDGVKN QA K+LK+  L DLCFFYHSG K+  
Sbjct: 4   EKHYWLLKTEPGEWSWEDQAANEGLSNWDGVKNKQAQKNLKAMHLGDLCFFYHSGAKARR 63

Query: 201 XXXXXXXXXEWYQD-DVTGGGAIDVKAVGEMRRPVDLKEMKGELKNNKEFGLFRQPRLSV 377
                    EWY++ D   GGA+DV+ VGEMRR VDL EMK E    K FGLFRQPRLSV
Sbjct: 64  VVGVVSVVREWYEEGDGGAGGAVDVRCVGEMRRAVDLGEMKKE-SGLKGFGLFRQPRLSV 122

Query: 378 VRVPIDVWQKICELGNGYEGDG 443
           V VP +VW+++CE+G GYEGDG
Sbjct: 123 VPVPEEVWKRVCEMGGGYEGDG 144


Top