BLASTX nr result
ID: Atractylodes21_contig00042343
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00042343
(432 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI39303.3| unnamed protein product [Vitis vinifera] 183 1e-44
ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containi... 183 1e-44
ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 174 5e-42
ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containi... 174 5e-42
ref|XP_002521822.1| pentatricopeptide repeat-containing protein,... 160 1e-37
>emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 183 bits (465), Expect = 1e-44
Identities = 91/140 (65%), Positives = 108/140 (77%)
Frame = -2
Query: 422 LTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEMLQVLVEMHRSG 243
LTN L+ MY KCGR+D ARL F+ +D LD VSWNS+IAGYV+ +DEML++LV+M R G
Sbjct: 78 LTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHG 137
Query: 242 VRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMYAKIGDLDD 63
+ +SY LGS L AC SNF S+ GK+LH C+VKLG DLDVVVGTALLD YAKIGDL+D
Sbjct: 138 LNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLED 197
Query: 62 AVSTFSLLGDKNVVMYNAMI 3
A F L+ D NVVMYNAMI
Sbjct: 198 ATKIFKLMPDPNVVMYNAMI 217
Score = 71.2 bits (173), Expect = 8e-11
Identities = 42/143 (29%), Positives = 76/143 (53%)
Frame = -2
Query: 431 DAFLTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEMLQVLVEMH 252
D F+ N LV +YS G ++ F + LD VSW S+I G+V+ + L + E+
Sbjct: 284 DEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELL 343
Query: 251 RSGVRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMYAKIGD 72
SG + + + +L+AC + ++ G+ +H+ ++K G ++ + + MYAK GD
Sbjct: 344 FSGRKPDEFTISIMLSACANLA--AVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGD 401
Query: 71 LDDAVSTFSLLGDKNVVMYNAMI 3
+D A TF + ++V ++ MI
Sbjct: 402 IDSANMTFKETKNPDIVSWSVMI 424
Score = 61.6 bits (148), Expect = 6e-08
Identities = 33/110 (30%), Positives = 57/110 (51%)
Frame = -2
Query: 332 VSWNSMIAGYVKARLHDEMLQVLVEMHRSGVRFSSYVLGSVLNACCSNFDWSLVWGKLLH 153
VSWNS+I+GY + + E++ + E S +R + + L+ C D L G+L+H
Sbjct: 7 VSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRL--GRLIH 64
Query: 152 SCSVKLGWDLDVVVGTALLDMYAKIGDLDDAVSTFSLLGDKNVVMYNAMI 3
+ G V++ +L+DMY K G +D A F + + V +N++I
Sbjct: 65 ALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 114
Score = 57.8 bits (138), Expect = 9e-07
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 5/148 (3%)
Frame = -2
Query: 431 DAFLTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKA-----RLHDEMLQV 267
D + L+ Y+K G ++ A F + V +N+MIAG+++ +E + +
Sbjct: 178 DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 237
Query: 266 LVEMHRSGVRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMY 87
EM G++ S + S+L A CS + + GK +H+ K D +G AL+++Y
Sbjct: 238 FFEMQSRGMKPSEFTFSSILKA-CSTIE-AFECGKQIHAQIFKYNLQSDEFIGNALVELY 295
Query: 86 AKIGDLDDAVSTFSLLGDKNVVMYNAMI 3
+ G ++D + F +VV + ++I
Sbjct: 296 SLSGSIEDGLKCFHSTPKLDVVSWTSLI 323
>ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 183 bits (465), Expect = 1e-44
Identities = 91/140 (65%), Positives = 108/140 (77%)
Frame = -2
Query: 422 LTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEMLQVLVEMHRSG 243
LTN L+ MY KCGR+D ARL F+ +D LD VSWNS+IAGYV+ +DEML++LV+M R G
Sbjct: 157 LTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHG 216
Query: 242 VRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMYAKIGDLDD 63
+ +SY LGS L AC SNF S+ GK+LH C+VKLG DLDVVVGTALLD YAKIGDL+D
Sbjct: 217 LNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLED 276
Query: 62 AVSTFSLLGDKNVVMYNAMI 3
A F L+ D NVVMYNAMI
Sbjct: 277 ATKIFKLMPDPNVVMYNAMI 296
Score = 85.9 bits (211), Expect = 3e-15
Identities = 47/141 (33%), Positives = 74/141 (52%)
Frame = -2
Query: 425 FLTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEMLQVLVEMHRS 246
FL N L+ MY KCG D A+ FDR + VSWNS+I+GY + + E++ + E S
Sbjct: 55 FLLNNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMS 114
Query: 245 GVRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMYAKIGDLD 66
+R + + L+ C D L G+L+H+ G V++ +L+DMY K G +D
Sbjct: 115 DLRLDKFTFSNALSVCGRTLDLRL--GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRID 172
Query: 65 DAVSTFSLLGDKNVVMYNAMI 3
A F + + V +N++I
Sbjct: 173 WARLVFESADELDSVSWNSLI 193
Score = 71.2 bits (173), Expect = 8e-11
Identities = 42/143 (29%), Positives = 76/143 (53%)
Frame = -2
Query: 431 DAFLTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEMLQVLVEMH 252
D F+ N LV +YS G ++ F + LD VSW S+I G+V+ + L + E+
Sbjct: 363 DEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELL 422
Query: 251 RSGVRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMYAKIGD 72
SG + + + +L+AC + ++ G+ +H+ ++K G ++ + + MYAK GD
Sbjct: 423 FSGRKPDEFTISIMLSACANLA--AVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGD 480
Query: 71 LDDAVSTFSLLGDKNVVMYNAMI 3
+D A TF + ++V ++ MI
Sbjct: 481 IDSANMTFKETKNPDIVSWSVMI 503
Score = 57.8 bits (138), Expect = 9e-07
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 5/148 (3%)
Frame = -2
Query: 431 DAFLTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKA-----RLHDEMLQV 267
D + L+ Y+K G ++ A F + V +N+MIAG+++ +E + +
Sbjct: 257 DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 316
Query: 266 LVEMHRSGVRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMY 87
EM G++ S + S+L A CS + + GK +H+ K D +G AL+++Y
Sbjct: 317 FFEMQSRGMKPSEFTFSSILKA-CSTIE-AFECGKQIHAQIFKYNLQSDEFIGNALVELY 374
Query: 86 AKIGDLDDAVSTFSLLGDKNVVMYNAMI 3
+ G ++D + F +VV + ++I
Sbjct: 375 SLSGSIEDGLKCFHSTPKLDVVSWTSLI 402
>ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 174 bits (442), Expect = 5e-42
Identities = 84/140 (60%), Positives = 108/140 (77%)
Frame = -2
Query: 422 LTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEMLQVLVEMHRSG 243
LTN L+ MYSKCG+VD AR+ FD SD LD VSWNS+IAGYV+ ++E+L +L +MH++G
Sbjct: 197 LTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNG 256
Query: 242 VRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMYAKIGDLDD 63
+ F++Y LGS L AC SNF+ ++G +LH ++KLG LDVVVGTALLDMYAK G LDD
Sbjct: 257 LAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDD 316
Query: 62 AVSTFSLLGDKNVVMYNAMI 3
A+ F + DKNVVMYNAM+
Sbjct: 317 AIQIFDQMVDKNVVMYNAMM 336
Score = 76.3 bits (186), Expect = 2e-12
Identities = 45/141 (31%), Positives = 74/141 (52%)
Frame = -2
Query: 425 FLTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEMLQVLVEMHRS 246
FL N L+ MY KCG A FD+ + V++NS+I+GYV+ D+++ + + R
Sbjct: 95 FLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRL 154
Query: 245 GVRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMYAKIGDLD 66
G++ Y L AC + + S GK++H + G VV+ +L+DMY+K G +D
Sbjct: 155 GLKLDKYTCAGALTACSQSGNLSA--GKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVD 212
Query: 65 DAVSTFSLLGDKNVVMYNAMI 3
A F + V +N++I
Sbjct: 213 YARILFDHSDKLDGVSWNSLI 233
Score = 65.1 bits (157), Expect = 6e-09
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Frame = -2
Query: 431 DAFLTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEM-----LQV 267
D + L+ MY+K G +D A FD+ + V +N+M+AG ++ ++ L +
Sbjct: 297 DVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNL 356
Query: 266 LVEMHRSGVRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMY 87
EM G++ S + S+L AC D+ + K +H+ K G D +G+ L+D+Y
Sbjct: 357 FFEMKSCGIKPSMFTYSSLLKACIIVEDFK--FAKQVHALMCKNGLLSDEYIGSILIDLY 414
Query: 86 AKIGDLDDAVSTFSLLGDKNVVMYNAMI 3
+ +G + DA+ F+ + + +V AMI
Sbjct: 415 SVLGSMMDALLCFNSIHNLTIVPMTAMI 442
>ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 174 bits (442), Expect = 5e-42
Identities = 84/140 (60%), Positives = 108/140 (77%)
Frame = -2
Query: 422 LTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEMLQVLVEMHRSG 243
LTN L+ MYSKCG+VD AR+ FD SD LD VSWNS+IAGYV+ ++E+L +L +MH++G
Sbjct: 104 LTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNG 163
Query: 242 VRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMYAKIGDLDD 63
+ F++Y LGS L AC SNF+ ++G +LH ++KLG LDVVVGTALLDMYAK G LDD
Sbjct: 164 LAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDD 223
Query: 62 AVSTFSLLGDKNVVMYNAMI 3
A+ F + DKNVVMYNAM+
Sbjct: 224 AIQIFDQMVDKNVVMYNAMM 243
Score = 65.9 bits (159), Expect = 3e-09
Identities = 40/137 (29%), Positives = 69/137 (50%)
Frame = -2
Query: 413 PLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEMLQVLVEMHRSGVRF 234
P + KCG A FD+ + V++NS+I+GYV+ D+++ + + R G++
Sbjct: 6 PFSSRQCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKL 65
Query: 233 SSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMYAKIGDLDDAVS 54
Y L AC + + S GK++H + G VV+ +L+DMY+K G +D A
Sbjct: 66 DKYNCAGALTACSQSGNLSA--GKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARI 123
Query: 53 TFSLLGDKNVVMYNAMI 3
F + V +N++I
Sbjct: 124 LFDHSDKLDGVSWNSLI 140
Score = 65.1 bits (157), Expect = 6e-09
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Frame = -2
Query: 431 DAFLTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEM-----LQV 267
D + L+ MY+K G +D A FD+ + V +N+M+AG ++ ++ L +
Sbjct: 204 DVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNL 263
Query: 266 LVEMHRSGVRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMY 87
EM G++ S + S+L AC D+ + K +H+ K G D +G+ L+D+Y
Sbjct: 264 FFEMKSCGIKPSMFTYSSLLKACIIVEDFK--FAKQVHALMCKNGLLSDEYIGSILIDLY 321
Query: 86 AKIGDLDDAVSTFSLLGDKNVVMYNAMI 3
+ +G + DA+ F+ + + +V AMI
Sbjct: 322 SVLGSMMDALLCFNSIHNLTIVPMTAMI 349
>ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539035|gb|EEF40632.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 793
Score = 160 bits (405), Expect = 1e-37
Identities = 78/141 (55%), Positives = 103/141 (73%)
Frame = -2
Query: 425 FLTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEMLQVLVEMHRS 246
FLTN L+ MY KC R+D ARL F+ SD LD+VSWNS+I GY + ++EML++LV+MH +
Sbjct: 146 FLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHT 205
Query: 245 GVRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMYAKIGDLD 66
G+R +++ LGS L +C N + + +GK LH +VK G DLD+VVGTALLDMYAK G L
Sbjct: 206 GLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLG 265
Query: 65 DAVSTFSLLGDKNVVMYNAMI 3
DA+ F ++NVVMYNAMI
Sbjct: 266 DAIQLFRTSPNQNVVMYNAMI 286
Score = 74.3 bits (181), Expect = 9e-12
Identities = 44/143 (30%), Positives = 76/143 (53%)
Frame = -2
Query: 431 DAFLTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEMLQVLVEMH 252
D F+ + L+ +YS G + F+ + LD VSW +MIAGY + + L + E+
Sbjct: 353 DEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELL 412
Query: 251 RSGVRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMYAKIGD 72
SG + +++ ++L+AC + G+ +H +VK G +V + + MYAK G+
Sbjct: 413 ASGKKPDEFIITTMLSACADVA--AERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGN 470
Query: 71 LDDAVSTFSLLGDKNVVMYNAMI 3
LD A TF + + +VV ++ MI
Sbjct: 471 LDSAKITFEEIKNPDVVSWSVMI 493
Score = 64.7 bits (156), Expect = 7e-09
Identities = 39/141 (27%), Positives = 70/141 (49%)
Frame = -2
Query: 425 FLTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHDEMLQVLVEMHRS 246
FL N + +YSK G + A+ FDR +S+N +I+GY + + + + E +
Sbjct: 45 FLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMA 104
Query: 245 GVRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMYAKIGDLD 66
++ + VL+AC D++L GK++H ++ G V + L+DMY K +D
Sbjct: 105 CLKLDKFSYAGVLSACGQIKDFAL--GKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERID 162
Query: 65 DAVSTFSLLGDKNVVMYNAMI 3
A F + + V +N++I
Sbjct: 163 HARLLFESSDELDNVSWNSLI 183
Score = 64.7 bits (156), Expect = 7e-09
Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Frame = -2
Query: 431 DAFLTNPLVAMYSKCGRVDQARLAFDRSDGLDDVSWNSMIAGYVKARLHD-----EMLQV 267
D + L+ MY+K G + A F S + V +N+MIAG+++ D E L++
Sbjct: 247 DIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKL 306
Query: 266 LVEMHRSGVRFSSYVLGSVLNACCSNFDWSLVWGKLLHSCSVKLGWDLDVVVGTALLDMY 87
+M R G++ S + S++ C N + +GK +H+ K D +G+ L+++Y
Sbjct: 307 FSQMQRQGIKPSDFTFSSIIKIC--NHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELY 364
Query: 86 AKIGDLDDAVSTFSLLGDKNVVMYNAMI 3
+ +G +D + F+ ++V + MI
Sbjct: 365 SLLGSTEDQLKCFNSTPKLDIVSWTTMI 392