BLASTX nr result

ID: Atractylodes21_contig00042295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042295
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528507.1| spliceosome associated protein, putative [Ri...    81   8e-14
ref|XP_002310658.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
gb|ABK92580.1| unknown [Populus trichocarpa]                           80   1e-13
ref|XP_004158500.1| PREDICTED: LOW QUALITY PROTEIN: probable spl...    79   4e-13
ref|XP_004138633.1| PREDICTED: probable splicing factor 3A subun...    79   4e-13

>ref|XP_002528507.1| spliceosome associated protein, putative [Ricinus communis]
           gi|223532067|gb|EEF33876.1| spliceosome associated
           protein, putative [Ricinus communis]
          Length = 816

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = -3

Query: 236 ANKQKLSGKAGFLKDNLSLAYYNVGGGEALSLSLRERGGRKR 111
           ANKQKLSGKAGFLKDN+SLAYYNVG G+ALSLSLRERGGRKR
Sbjct: 775 ANKQKLSGKAGFLKDNMSLAYYNVGAGDALSLSLRERGGRKR 816


>ref|XP_002310658.1| predicted protein [Populus trichocarpa] gi|222853561|gb|EEE91108.1|
           predicted protein [Populus trichocarpa]
          Length = 795

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = -3

Query: 236 ANKQKLSGKAGFLKDNLSLAYYNVGGGEALSLSLRERGGRKR 111
           ANKQKLSGKAGFLKDN+SLAYYNVG GE+LSLSLRERGGRKR
Sbjct: 754 ANKQKLSGKAGFLKDNMSLAYYNVGPGESLSLSLRERGGRKR 795


>gb|ABK92580.1| unknown [Populus trichocarpa]
          Length = 287

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = -3

Query: 236 ANKQKLSGKAGFLKDNLSLAYYNVGGGEALSLSLRERGGRKR 111
           ANKQKLSGKAGFLKDN+SLAYYNVG GE+LSLSLRERGGRKR
Sbjct: 246 ANKQKLSGKAGFLKDNMSLAYYNVGPGESLSLSLRERGGRKR 287


>ref|XP_004158500.1| PREDICTED: LOW QUALITY PROTEIN: probable splicing factor 3A subunit
           1-like [Cucumis sativus]
          Length = 809

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/42 (90%), Positives = 39/42 (92%)
 Frame = -3

Query: 236 ANKQKLSGKAGFLKDNLSLAYYNVGGGEALSLSLRERGGRKR 111
           ANKQKLSGK GFLKDN+SLAYYNVG GE LSLSLRERGGRKR
Sbjct: 768 ANKQKLSGKPGFLKDNMSLAYYNVGAGEGLSLSLRERGGRKR 809


>ref|XP_004138633.1| PREDICTED: probable splicing factor 3A subunit 1-like [Cucumis
           sativus]
          Length = 809

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/42 (90%), Positives = 39/42 (92%)
 Frame = -3

Query: 236 ANKQKLSGKAGFLKDNLSLAYYNVGGGEALSLSLRERGGRKR 111
           ANKQKLSGK GFLKDN+SLAYYNVG GE LSLSLRERGGRKR
Sbjct: 768 ANKQKLSGKPGFLKDNMSLAYYNVGAGEGLSLSLRERGGRKR 809


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