BLASTX nr result

ID: Atractylodes21_contig00042280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042280
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    67   1e-09
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    67   1e-09
ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232...    63   3e-08
gb|ADN34181.1| retrotransposon protein [Cucumis melo subsp. melo]      61   1e-07
ref|XP_004172376.1| PREDICTED: uncharacterized protein LOC101223...    60   2e-07

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/51 (54%), Positives = 41/51 (80%)
 Frame = +3

Query: 150 DVQRLSDQELQLKRACGLCYRCDEKFSPGHRCKRKELSVFVVQDTNEEQEG 302
           +++RLS++ELQ KR  GLC+RCDEK++ GHRCK+KELS+ +  +  EE+ G
Sbjct: 333 EIRRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYG 383


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
 Frame = +3

Query: 105 TSTNPIPKVPLNHTS--DVQRLSDQELQLKRACGLCYRCDEKFSPGHRCKRKELSVFVVQ 278
           TS N     PL+     +++RL+++ELQ KRA GLC++CDEK+  GH+C+RKELSV  ++
Sbjct: 382 TSVNNAKPPPLSSRGFGEMRRLTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVLFME 441

Query: 279 DTNEEQ 296
           D  E++
Sbjct: 442 DNEEDE 447


>ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232566 [Cucumis sativus]
          Length = 707

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
 Frame = +3

Query: 21  KNKTLGRIKGVSPWTGKKNSPMAT-EIRGTSTNPIPKVPLNHTSDVQRLSDQELQLKRAC 197
           KN T+G   G S   G  N PM T  +RGT+   + K  L      +RLSD E Q ++  
Sbjct: 282 KNSTMGN-SGESK--GNWNWPMRTITLRGTADEEVRKTGLT-----KRLSDAEFQSRKEK 333

Query: 198 GLCYRCDEKFSPGHRCKRK---ELSVFVVQDTNEEQE 299
           GLC+RC+EK+S  H+CK K   EL + VV   NEE E
Sbjct: 334 GLCFRCNEKYSHDHKCKMKEQRELRMLVVMGENEEYE 370


>gb|ADN34181.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 295

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
 Frame = +3

Query: 6   IKADEKNK---TLGRIKGVSPWTGKKNSPMATEIRGTSTNPIPKVPLNHTSDVQRLSDQE 176
           ++A+ K++   TL    G   W       +   I+G      P+ P      V+RLSD E
Sbjct: 183 LQAEVKSRHPVTLEECSGKPKWADFAMKQLTLPIKGNFVKKEPQPP------VKRLSDSE 236

Query: 177 LQLKRACGLCYRCDEKFSPGHRCKRK---ELSVFVVQDTNEEQE 299
            + +   GLC+RC++K+SPGHRCK K   EL  F+   TNE++E
Sbjct: 237 FRARLDKGLCFRCNDKYSPGHRCKAKTNRELMFFI---TNEDEE 277


>ref|XP_004172376.1| PREDICTED: uncharacterized protein LOC101223371 [Cucumis sativus]
          Length = 943

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
 Frame = +3

Query: 66  GKKNSPMAT-EIRGTSTNPIPKVPLNHTSDVQRLSDQELQLKRACGLCYRCDEKFSPGHR 242
           G  N PM T  +RGTS   + K         +RLSD E Q ++  GLC+RC+EK+S  H+
Sbjct: 300 GNWNWPMRTVTLRGTSGEEVRKA-----GPTKRLSDAEFQSRKEKGLCFRCNEKYSHDHK 354

Query: 243 CKRK---ELSVFVVQDTNEEQE 299
           CK K   EL + VV   NEE E
Sbjct: 355 CKTKEQRELHMLVVMGENEEYE 376


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