BLASTX nr result

ID: Atractylodes21_contig00042273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042273
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...    89   4e-16
ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi...    87   1e-15
ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g...    84   9e-15
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...    80   1e-13
ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Gly...    78   7e-13

>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
           gi|222835491|gb|EEE73926.1| f-box family protein
           [Populus trichocarpa]
          Length = 534

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 55/102 (53%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
 Frame = +3

Query: 63  MGQSHSFTAGVANRRRDNVVDHSCRSMGAKDPKELRSFLAEIKVEEEE----CGSGD-IS 227
           MGQS S TA + +RR  N      RS   +   +    +  ++VEE+     C   D IS
Sbjct: 1   MGQSAS-TALITSRRDSN------RSSSHRSKSKFTVPIMPVQVEEQTEFIFCEGPDYIS 53

Query: 228 ILPDACLACIFQFLGSGDRKQCSLVCRRWLEIEGQSRHRLSL 353
            LPD CLACIFQ L SGDRK CSLVCRRWL IEGQSRHRLSL
Sbjct: 54  DLPDECLACIFQSLNSGDRKHCSLVCRRWLRIEGQSRHRLSL 95


>ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera]
          Length = 541

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 54/100 (54%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
 Frame = +3

Query: 63  MGQSHSFTA-GVANRRRDNVVDHSCRSMGAKDPKELRSFLAEIKVEEEECGSG--DISIL 233
           MGQS S +A    + RR +   H  RS   K   ++ S   E  V+  +       IS L
Sbjct: 1   MGQSASTSAISSGSSRRGSNHPHRSRS---KSMVQIPSMQVEENVQFRQIDEDLDYISDL 57

Query: 234 PDACLACIFQFLGSGDRKQCSLVCRRWLEIEGQSRHRLSL 353
           PD CLACIFQ LGSGDRKQCSLVCRRWL IEGQ+RHRLSL
Sbjct: 58  PDECLACIFQSLGSGDRKQCSLVCRRWLRIEGQTRHRLSL 97


>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
           gi|222842891|gb|EEE80438.1| f-box family protein
           [Populus trichocarpa]
          Length = 533

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 51/99 (51%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
 Frame = +3

Query: 63  MGQSHSFTAGVANRRRDNVVDHSCRSMGAKD--PKELRSFLAEIKVEEEECGSGDISILP 236
           MGQ+ S TA + +RR  N+     +S       P ++      + VE  +     IS LP
Sbjct: 1   MGQTTS-TALITSRRDSNLSSQRSKSKFTVPIIPMQVEEQTEYVLVEAPDY----ISDLP 55

Query: 237 DACLACIFQFLGSGDRKQCSLVCRRWLEIEGQSRHRLSL 353
           D CLACIFQ L SGDRK CSLVCRRWL IEGQSRHRLSL
Sbjct: 56  DECLACIFQSLSSGDRKSCSLVCRRWLRIEGQSRHRLSL 94


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
           gi|449515093|ref|XP_004164584.1| PREDICTED: F-box
           protein At1g47056-like [Cucumis sativus]
          Length = 535

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 54/99 (54%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
 Frame = +3

Query: 63  MGQSHSFTAGVANRRRDNVVDHSCRSMGAKDPKELRSFLAEIK-VEEEECGSGD-ISILP 236
           MGQS S +A + +RR  N   HS RS            L E   V+E   G+ D IS LP
Sbjct: 1   MGQSAS-SAAILSRRDSN---HSHRSKIKSTALISPMHLDETDDVQEIIHGASDFISDLP 56

Query: 237 DACLACIFQFLGSGDRKQCSLVCRRWLEIEGQSRHRLSL 353
           D CLACIFQ L S DRK CSLVCRRW ++EGQSRHRLSL
Sbjct: 57  DECLACIFQSLSSVDRKGCSLVCRRWFKVEGQSRHRLSL 95


>ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Glycine max]
          Length = 549

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 50/110 (45%), Positives = 61/110 (55%), Gaps = 13/110 (11%)
 Frame = +3

Query: 63  MGQSHSFTAGVANRRRD----NVVDHSCRSMGAKDPKELRSFLAEIKVEEEECGSGD--- 221
           MGQS S  A  + R RD    +V     RS     P  +  + +    +E E   G+   
Sbjct: 1   MGQSVSSAAVASRRERDPGHLSVNTSKTRSTALITP--MAGYSSGAGEDESENRRGEAVT 58

Query: 222 ------ISILPDACLACIFQFLGSGDRKQCSLVCRRWLEIEGQSRHRLSL 353
                 IS LP+ CLA +FQFL S DR +CSLVCRRWL+IEGQSRHRLSL
Sbjct: 59  DETTDYISDLPNECLASVFQFLSSADRNRCSLVCRRWLQIEGQSRHRLSL 108


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