BLASTX nr result

ID: Atractylodes21_contig00042173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042173
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...    56   5e-06

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/105 (39%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
 Frame = +3

Query: 264 QPTRPVLSVSPQAQQAVPRPNNYMPGPSGPRXXXXXXXXXXXXXXXQPQIHVNAEAANQY 443
           Q  RP+ S SPQ  Q  P  N++MPG +GP                QPQ  +NA A  Q+
Sbjct: 108 QQNRPLTSSSPQPNQTAPPLNSHMPGLAGPGMPFSSSYTFAPASFGQPQSTINASA--QF 165

Query: 444 QQTSANMPSFPLGGPAWSSDGQTSKA-VTPVLQPAEQISVVPSVP 575
           Q  S      P+GG  W S G  S A VTPV Q  +Q SV   +P
Sbjct: 166 QPIS--QMHAPVGGQPWLSSGSQSGALVTPVHQAGQQPSVTADIP 208


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 41/107 (38%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
 Frame = +3

Query: 264 QPTRPVLSVSPQAQQAVPRPNNYMPGPSGPRXXXXXXXXXXXXXXXQPQIHVNAEAANQY 443
           Q  RP+ S SPQ  Q  P  N++MPG   P                QPQ  +NA A  Q+
Sbjct: 122 QQNRPLTSSSPQPNQTAPPLNSHMPGLFAP------------ASFGQPQSTINASA--QF 167

Query: 444 QQTSANMPSFPLGGPAWSSDGQTSKA-VTPVLQPAEQISVVPSVPVT 581
           Q  S      P+GG  W S G  S A VTPV Q  +Q SV   +PV+
Sbjct: 168 QPIS--QMHAPVGGQPWLSSGSQSGALVTPVHQAGQQPSVTADIPVS 212


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