BLASTX nr result

ID: Atractylodes21_contig00042163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042163
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538048.1| PREDICTED: E3 SUMO-protein ligase SIZ1-like ...    96   4e-18
ref|XP_003606454.1| E3 SUMO-protein ligase SIZ1 [Medicago trunca...    92   3e-17
ref|XP_003539732.1| PREDICTED: E3 SUMO-protein ligase SIZ1-like ...    91   1e-16
ref|XP_002311104.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
emb|CBI16282.3| unnamed protein product [Vitis vinifera]               91   1e-16

>ref|XP_003538048.1| PREDICTED: E3 SUMO-protein ligase SIZ1-like [Glycine max]
          Length = 879

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/89 (48%), Positives = 61/89 (68%)
 Frame = +2

Query: 20  QCADSRCQVLQHIPCVVFPKVSLEGISPASSQFYCELCRISRSDPFLKTLAHLLYPVKLR 199
           +C D RC V QHI CV+ P+   EGI P   +FYCELCR++R+DPF  ++AH L+PVKL 
Sbjct: 128 KCDDPRCHVWQHISCVIIPEKPTEGIPPVPDKFYCELCRLTRADPFWVSVAHPLHPVKLT 187

Query: 200 VLSNSMESLNLLRTGKIDFQITRAHLDLL 286
             SN  +  N +++ +  FQ+TRA +DL+
Sbjct: 188 TTSNPTDGNNPVQSVERTFQLTRADMDLV 216


>ref|XP_003606454.1| E3 SUMO-protein ligase SIZ1 [Medicago truncatula]
           gi|355507509|gb|AES88651.1| E3 SUMO-protein ligase SIZ1
           [Medicago truncatula]
          Length = 882

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/89 (47%), Positives = 60/89 (67%)
 Frame = +2

Query: 20  QCADSRCQVLQHIPCVVFPKVSLEGISPASSQFYCELCRISRSDPFLKTLAHLLYPVKLR 199
           +C D+RCQV QHI CV+ P+  +EGI P   +FYCELCR+SR+DPF  +++H L PVKL 
Sbjct: 132 KCDDARCQVWQHISCVIIPEKPMEGIPPVPDKFYCELCRLSRADPFWVSVSHPLLPVKLA 191

Query: 200 VLSNSMESLNLLRTGKIDFQITRAHLDLL 286
             S   +  N ++  +  FQ+TRA  D++
Sbjct: 192 TTSIPTDGTNPVQCVERTFQLTRADKDMV 220


>ref|XP_003539732.1| PREDICTED: E3 SUMO-protein ligase SIZ1-like [Glycine max]
          Length = 880

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/89 (47%), Positives = 60/89 (67%)
 Frame = +2

Query: 20  QCADSRCQVLQHIPCVVFPKVSLEGISPASSQFYCELCRISRSDPFLKTLAHLLYPVKLR 199
           +C D+RC V QHI CV+ P+   EGI     +FYCELCR++R+DPF  ++AH L+PVKL 
Sbjct: 129 KCDDARCHVWQHISCVIIPEKPTEGIPLVPDKFYCELCRLTRADPFWVSVAHPLHPVKLT 188

Query: 200 VLSNSMESLNLLRTGKIDFQITRAHLDLL 286
             SN  +  N +++ +  FQ+TRA  DL+
Sbjct: 189 TTSNPTDGNNPVQSVERTFQLTRADKDLV 217


>ref|XP_002311104.1| predicted protein [Populus trichocarpa] gi|222850924|gb|EEE88471.1|
           predicted protein [Populus trichocarpa]
          Length = 823

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/90 (50%), Positives = 60/90 (66%)
 Frame = +2

Query: 20  QCADSRCQVLQHIPCVVFPKVSLEGISPASSQFYCELCRISRSDPFLKTLAHLLYPVKLR 199
           QC DS+CQV QHI CV+F ++ +E   P    FYCE CRI R+DPF  T+AHLL+PVKL 
Sbjct: 128 QCIDSKCQVQQHISCVIFTEIPMESEHPPV--FYCETCRIERADPFWVTVAHLLFPVKLP 185

Query: 200 VLSNSMESLNLLRTGKIDFQITRAHLDLLK 289
             + S++  N L+  +  FQ+TR+   LLK
Sbjct: 186 SSNISIDGNNTLQNVETTFQLTRSDQHLLK 215


>emb|CBI16282.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/89 (46%), Positives = 59/89 (66%)
 Frame = +2

Query: 20  QCADSRCQVLQHIPCVVFPKVSLEGISPASSQFYCELCRISRSDPFLKTLAHLLYPVKLR 199
           +C D +CQV QHI CV+ P+ ++EGI P    FYCE+CR+SR+DPF  T+AH L PVKL 
Sbjct: 127 KCDDLKCQVWQHIGCVIIPEKTMEGIPPTPDPFYCEICRLSRADPFWVTVAHPLLPVKLT 186

Query: 200 VLSNSMESLNLLRTGKIDFQITRAHLDLL 286
             S   +  N +++ +  F +TRA  D++
Sbjct: 187 TTSIPTDGTNPVQSVEKTFHLTRADRDMV 215


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