BLASTX nr result

ID: Atractylodes21_contig00042161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042161
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...    69   3e-10
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...    65   4e-09
gb|AAC62795.1| contains similarity to retroviral aspartyl protea...    62   5e-08
ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212...    62   6e-08
gb|AEJ72555.1| putative retroelement polyprotein [Malus x domest...    62   6e-08

>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
 Frame = -3

Query: 267  DLLLKDALFIPDFIFNLISISALVNGSNLTATFLPGCVLVQDRSTKRTIGRGEHTGGLYI 88
            DL+LKD L+IPDF +NL+S+S L+       +F     L+QD+   +TIG+ E T GLY+
Sbjct: 1713 DLVLKDVLYIPDFKYNLLSVSTLLKDDKFAISFADSNCLIQDKWLLKTIGKAELTNGLYL 1772

Query: 87   L--KDQQMEPVEKSVTFVNNISVHTWHNRLG 1
            L  K++++  ++ +   +  +S   WH R+G
Sbjct: 1773 LRMKNEKVNCIQHT-ALMCKVSASMWHKRMG 1802


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/89 (42%), Positives = 52/89 (58%)
 Frame = -3

Query: 267 DLLLKDALFIPDFIFNLISISALVNGSNLTATFLPGCVLVQDRSTKRTIGRGEHTGGLYI 88
           D++L++ LFIP+F  NLISIS+L         F P C  +QD +   T+G G+  G LY+
Sbjct: 491 DIILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYV 550

Query: 87  LKDQQMEPVEKSVTFVNNISVHTWHNRLG 1
           L D Q   +  SV  V ++SV  WH RLG
Sbjct: 551 L-DTQSPAI--SVNAVVDVSV--WHKRLG 574


>gb|AAC62795.1| contains similarity to retroviral aspartyl proteases (Pfam:
           rvp.hmm, score: 11.80) [Arabidopsis thaliana]
          Length = 1244

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/89 (38%), Positives = 48/89 (53%)
 Frame = -3

Query: 267 DLLLKDALFIPDFIFNLISISALVNGSNLTATFLPGCVLVQDRSTKRTIGRGEHTGGLYI 88
           ++LL++ LF+P+F  NLISIS+L +       F P C  +QD +    IGRG   G LY+
Sbjct: 467 NILLRNVLFLPEFRLNLISISSLTSDIGSRVIFDPSCCEIQDLTKDLRIGRGRRIGNLYV 526

Query: 87  LKDQQMEPVEKSVTFVNNISVHTWHNRLG 1
           L      P   SV+    + V  WH R+G
Sbjct: 527 L---DTTPPLDSVSVNAVVDVSLWHMRMG 552


>ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212632 [Cucumis sativus]
           gi|449449869|ref|XP_004142687.1| PREDICTED:
           uncharacterized protein LOC101213831 [Cucumis sativus]
          Length = 440

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/62 (45%), Positives = 41/62 (66%)
 Frame = -3

Query: 267 DLLLKDALFIPDFIFNLISISALVNGSNLTATFLPGCVLVQDRSTKRTIGRGEHTGGLYI 88
           DL+LKD L+IPDF +NL+S+S L+       +F     L+QD+   +TIG+ E T GLY+
Sbjct: 369 DLVLKDVLYIPDFKYNLLSVSTLLKDDKFAISFADSNCLIQDKWLLKTIGKAELTNGLYL 428

Query: 87  LK 82
           L+
Sbjct: 429 LR 430


>gb|AEJ72555.1| putative retroelement polyprotein [Malus x domestica]
          Length = 1249

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/82 (41%), Positives = 45/82 (54%)
 Frame = -3

Query: 249 ALFIPDFIFNLISISALVNGSNLTATFLPGCVLVQDRSTKRTIGRGEHTGGLYILKDQQM 70
           AL++P F F L+S+  L N  N    F P  V+ QDR TK+ IG G +  GLY+L  Q +
Sbjct: 368 ALYVPSFPFQLLSVGRLTNSLNCDVIFSPFNVIFQDRITKKKIGEGMYKDGLYMLSLQPV 427

Query: 69  EPVEKSVTFVNNISVHTWHNRL 4
           E     V F+ N  +  WH RL
Sbjct: 428 EARGLQVGFLKNHLL--WHRRL 447


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