BLASTX nr result

ID: Atractylodes21_contig00042052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042052
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328268.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
gb|ABK95971.1| unknown [Populus trichocarpa]                          116   2e-24
ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]    97   1e-18
ref|XP_002520932.1| pentatricopeptide repeat-containing protein,...    92   3e-17

>ref|XP_002328268.1| predicted protein [Populus trichocarpa] gi|222837783|gb|EEE76148.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/109 (51%), Positives = 77/109 (70%)
 Frame = +3

Query: 168 MHYPAIISGSKLSNWVAKLKESSFSGRWQEVLALCNDLNKAGVQLTEPSLFHPVLKACSA 347
           M + AI+SGSKL NW+ ++KESS +G+WQEV++  +++ KAG+Q  + S+F P+LKA S 
Sbjct: 1   MRFSAIVSGSKLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSF 60

Query: 348 ISLTHGKSLHASGIKVGVESCTSIGNSIMDFYAKAGHMGSTFSVFDCMK 494
           +S  HGKSLHA  IK G +S TSIGNSIM FY + G       VF+ M+
Sbjct: 61  LSHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMR 109


>gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/109 (51%), Positives = 77/109 (70%)
 Frame = +3

Query: 168 MHYPAIISGSKLSNWVAKLKESSFSGRWQEVLALCNDLNKAGVQLTEPSLFHPVLKACSA 347
           M + AI+SGSKL NW+ ++KESS +G+WQEV++  +++ KAG+Q  + S+F P+LKA S 
Sbjct: 1   MRFSAIVSGSKLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSF 60

Query: 348 ISLTHGKSLHASGIKVGVESCTSIGNSIMDFYAKAGHMGSTFSVFDCMK 494
           +S  HGKSLHA  IK G +S TSIGNSIM FY + G       VF+ M+
Sbjct: 61  LSHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMR 109


>ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 49/111 (44%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 MHYPAIISGSKLSNWVAKLKESSFSGRWQ--EVLALCNDLNKAGVQLTEPSLFHPVLKAC 341
           M +P      KL NW   +K+S+    W   E  +  + + KAG QLT+P+L H +LKAC
Sbjct: 1   MRFPTTPLAPKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKAC 60

Query: 342 SAISLTHGKSLHASGIKVGVESCTSIGNSIMDFYAKAGHMGSTFSVFDCMK 494
           S++ + HGKS+HAS +K G +S TS GNS++DFY K G + S   VFD M+
Sbjct: 61  SSLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMR 111


>emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
          Length = 1007

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/111 (44%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 MHYPAIISGSKLSNWVAKLKESSFSGRWQ--EVLALCNDLNKAGVQLTEPSLFHPVLKAC 341
           M +P      KL NW   +K+S+    W   E  +  + + KAG QLT+P+L H +LKAC
Sbjct: 1   MRFPTTPLAPKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKAC 60

Query: 342 SAISLTHGKSLHASGIKVGVESCTSIGNSIMDFYAKAGHMGSTFSVFDCMK 494
           S++ + HGKS+HAS +K G +S TS GNS  DFY K G + S   VFD M+
Sbjct: 61  SSLPVRHGKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMR 111


>ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539898|gb|EEF41477.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 757

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
 Frame = +3

Query: 186 ISGSKLSNWVAKLKESSFSGRWQEVLALCNDLNKAGVQ--LTEPSLFHPVLKACSAISLT 359
           +S S+L +W  ++KE S + +W EV++   ++  AG+   L + +LF PVLKACS +S  
Sbjct: 22  LSTSRLLSWTLRIKELSSNEKWHEVISQYYEITNAGISHHLLDVTLFPPVLKACSYLSYI 81

Query: 360 HGKSLHASGIKVGVESCTSIGNSIMDFYAKAGHMGSTFSVFDCMK 494
            GK LHA  IK   +S TSIGNSI++FY K G + +  SVFD M+
Sbjct: 82  DGKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMR 126


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