BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042040
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...   281   2e-73
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...   279   9e-73
ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polype...   257   3e-66
ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp....   238   1e-60
ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containin...   238   2e-60

>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  281 bits (718), Expect = 2e-73
 Identities = 135/193 (69%), Positives = 163/193 (84%), Gaps = 1/193 (0%)
 Frame = -1

Query: 885 MFNLSKLEHTLRLQPHLLSLPINEAVKGELEGLFLDKVIANLGLCISVYDIESIDGGFIF 706
           MF LS +EHTLRL PHLL LP+NEA+KGELE LFLDKV+ANLGLCISVYDI SIDGGF+F
Sbjct: 1   MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISVYDIRSIDGGFVF 60

Query: 705 PNEGAPTYTVKFRLIIFRPFIGEVISARLIESNADGLRLSLGFFDDIYIPALLMPDSSYA 526
           P +GA TYTV+FRL++FRPF+GE+I+A+L ES+A+GL+LSLGFFDDIYIP  LMP+  + 
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDDIYIPVHLMPNPCHC 120

Query: 525 EPDEENKNQVKWIWKPDDEDYLIDGYDEIRFRVQNIKFPEIPKEQ-KESKPFAPMEIIGS 349
           EPD ENK+QV WIW   ++ + IDG DEIRF+VQ++ +P IP EQ KESKPFAPM I+GS
Sbjct: 121 EPDPENKSQVIWIWDYQEQKFPIDGLDEIRFQVQSVSYPPIPVEQPKESKPFAPMMIMGS 180

Query: 348 LATDGGLGPISWW 310
           L  D GLGP+SWW
Sbjct: 181 LDYD-GLGPVSWW 192


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  279 bits (713), Expect = 9e-73
 Identities = 135/193 (69%), Positives = 161/193 (83%), Gaps = 1/193 (0%)
 Frame = -1

Query: 885 MFNLSKLEHTLRLQPHLLSLPINEAVKGELEGLFLDKVIANLGLCISVYDIESIDGGFIF 706
           MF LS +EHTLRL PHLL LP+NEA+KGELE LFLDKVIANLGLCISVYDI SIDGGF+F
Sbjct: 1   MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISVYDIRSIDGGFVF 60

Query: 705 PNEGAPTYTVKFRLIIFRPFIGEVISARLIESNADGLRLSLGFFDDIYIPALLMPDSSYA 526
           P +GA TYTV+FRL++FRPF+GE+I+A+L ES+A+GLRLSLGFFDDIYIP  LMP+  + 
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDDIYIPVHLMPNPCHC 120

Query: 525 EPDEENKNQVKWIWKPDDEDYLIDGYDEIRFRVQNIKFPEIPKEQ-KESKPFAPMEIIGS 349
           EP+ E K QV WIW   ++ + IDG DEIRF+VQ++ +P IP EQ KESKPFAPM I+GS
Sbjct: 121 EPNPEKKGQVIWIWDYQEQKFPIDGIDEIRFQVQSVSYPPIPVEQPKESKPFAPMVIMGS 180

Query: 348 LATDGGLGPISWW 310
           L  D GLGP+SWW
Sbjct: 181 LDYD-GLGPVSWW 192


>ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polypeptide, putative
           [Ricinus communis] gi|223539824|gb|EEF41404.1|
           DNA-directed RNA polymerase III 25 kD polypeptide,
           putative [Ricinus communis]
          Length = 194

 Score =  257 bits (657), Expect = 3e-66
 Identities = 127/196 (64%), Positives = 156/196 (79%), Gaps = 4/196 (2%)
 Frame = -1

Query: 885 MFNLSKLEHTLRLQPHLLSLPINEAVKGELEGLFLDKVIANLGLCISVYDIESIDGGFIF 706
           MF LS++EHTLRL P LLSLP+ +AVK ELE +FLDKVIANLGLCISVYD+  IDGGFIF
Sbjct: 1   MFYLSEIEHTLRLPPSLLSLPLQDAVKKELEIIFLDKVIANLGLCISVYDVTHIDGGFIF 60

Query: 705 PNEGAPTYTVKFRLIIFRPFIGEVISARLIESNADGLRLSLGFFDDIYIPALLMPDSSYA 526
           P +GA TYTV+FR+++FRPF+GE+I A+L ESN DGLRLSLGFFDDIYIP+  +P  SY+
Sbjct: 61  PGDGASTYTVRFRIVVFRPFVGEIIVAKLKESNNDGLRLSLGFFDDIYIPSHRLPKPSYS 120

Query: 525 EPDEENKNQVKWIWKPDDED----YLIDGYDEIRFRVQNIKFPEIPKEQKESKPFAPMEI 358
           + D EN+ Q  WIW+   ED    + IDG DEI+FRV ++K+P +P EQ+E KPFAPM I
Sbjct: 121 QQDPENRYQAIWIWEFVSEDNKMEFNIDGLDEIKFRVDSVKYPPVPLEQQE-KPFAPMVI 179

Query: 357 IGSLATDGGLGPISWW 310
            GS+  D GLGP+SWW
Sbjct: 180 TGSI-DDEGLGPVSWW 194


>ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335460|gb|EFH65877.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score =  238 bits (608), Expect = 1e-60
 Identities = 109/195 (55%), Positives = 156/195 (80%), Gaps = 3/195 (1%)
 Frame = -1

Query: 885 MFNLSKLEHTLRLQPHLLSLPINEAVKGELEGLFLDKVIANLGLCISVYDIESIDGGFIF 706
           MF LS+LEH+LR+ PHLL+LP+ +A+K  L+ +FLDKV+A+LGLC+SVYDI+SI+GGF+ 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSVYDIKSIEGGFVL 60

Query: 705 PNEGAPTYTVKFRLIIFRPFIGEVISARLIESNADGLRLSLGFFDDIYIPALLMPDSSYA 526
           P +GA TY V FR+++FRPF+GEVI+A+  ES+++GLRL+LGFFDDIY+PA LMP  +  
Sbjct: 61  PGDGAATYKVGFRIVVFRPFVGEVIAAKFKESDSNGLRLTLGFFDDIYVPAPLMPKPNRC 120

Query: 525 EPDEENKNQVKWIWKPDD--EDYLIDGYDEIRFRVQNIKFPEIPKEQKE-SKPFAPMEII 355
           EPD  N+ Q+ W+W+  +  ED++ID   +I+FRV++I +P +P E+ E +KPFAPM + 
Sbjct: 121 EPDPYNRKQMIWVWEYGEPLEDFIIDDSCQIKFRVESISYPSVPTERAEDAKPFAPMVVT 180

Query: 354 GSLATDGGLGPISWW 310
           G++  D GLGP+SWW
Sbjct: 181 GNMDED-GLGPVSWW 194


>ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis thaliana]
           gi|7523702|gb|AAF63141.1|AC011001_11 hypothetical
           protein [Arabidopsis thaliana]
           gi|17529108|gb|AAL38764.1| putative RNA polymerase
           [Arabidopsis thaliana] gi|23296904|gb|AAN13199.1|
           putative RNA polymerase [Arabidopsis thaliana]
           gi|332189917|gb|AEE28038.1| RNA polymerase Rpb7
           N-terminal domain-containing protein [Arabidopsis
           thaliana]
          Length = 204

 Score =  238 bits (607), Expect = 2e-60
 Identities = 107/195 (54%), Positives = 155/195 (79%), Gaps = 3/195 (1%)
 Frame = -1

Query: 885 MFNLSKLEHTLRLQPHLLSLPINEAVKGELEGLFLDKVIANLGLCISVYDIESIDGGFIF 706
           MF LS+LEH+LR+ PHLL+LP+ +A+K  L+ +FLDKV+A+LGLC+S+YDI+S++GGF+ 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVL 60

Query: 705 PNEGAPTYTVKFRLIIFRPFIGEVISARLIESNADGLRLSLGFFDDIYIPALLMPDSSYA 526
           P +GA TY V  R+++FRPF+GEVI+A+  ES+A+GLRL+LGFFDDIY+PA LMP  +  
Sbjct: 61  PGDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRC 120

Query: 525 EPDEENKNQVKWIWKPDD--EDYLIDGYDEIRFRVQNIKFPEIPKEQKE-SKPFAPMEII 355
           EPD  N+ Q+ W+W+  +  EDY++D   +I+FRV++I +P +P E+ E +KPFAPM + 
Sbjct: 121 EPDPYNRKQMIWVWEYGEPKEDYIVDDACQIKFRVESISYPSVPTERAEDAKPFAPMVVT 180

Query: 354 GSLATDGGLGPISWW 310
           G++  D GLGP+SWW
Sbjct: 181 GNM-DDDGLGPVSWW 194