BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042039
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...   179   2e-43
ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...   176   1e-42
emb|CBI20738.3| unnamed protein product [Vitis vinifera]              176   1e-42
ref|NP_195043.1| pentatricopeptide repeat-containing protein [Ar...   169   3e-40
ref|XP_002867196.1| pentatricopeptide repeat-containing protein ...   167   1e-39

>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score =  179 bits (455), Expect = 2e-43
 Identities = 95/159 (59%), Positives = 116/159 (72%)
 Frame = +2

Query: 29   TADRFLTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGSHLGNVEEGX 208
            T+DRFL NNL++MYSKCGS+ SARQLFD  P RDLVTWN++L+AYA    S   +V EG 
Sbjct: 736  TSDRFLANNLITMYSKCGSVSSARQLFDRTPDRDLVTWNAVLSAYARSDESEYDHVVEGF 795

Query: 209  XXXXXXXXXXXXXXTKLTLAPVLKLCSMSSYVWASEAVHGYAAKLGLESEMLISGALVNT 388
                          +KLTLAP+LKLC +S YV AS+AVHGYA K+GLE ++ +SGALVN 
Sbjct: 796  HIFRLLRERFVST-SKLTLAPMLKLCLLSGYVCASQAVHGYAVKIGLELDVFVSGALVNI 854

Query: 389  YIKFGKGREARMMFDEMAEYDRDVVLWNMMLRAYVKMGV 505
            Y KFG  REAR +FD M E  RDVVLWN+ML+AYV+MG+
Sbjct: 855  YSKFGLVREARGLFDIMQE--RDVVLWNVMLKAYVEMGL 891



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 6/168 (3%)
 Frame = +2

Query: 17   HGYTTADRF-----LTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGS 181
            HG T    F     + N+L++MYSK G +  A  +F  M   DL++WNS+++ YA     
Sbjct: 1011 HGMTLKSGFDSVVSVANSLINMYSKMGFVSLAHTVFTGMNELDLISWNSMISCYAQ---- 1066

Query: 182  HLGNVEEGXXXXXXXXXXXXXXXTKLTLAPVLKLC-SMSSYVWASEAVHGYAAKLGLESE 358
                +++                   TLA VLK C S++  ++ S+ +H Y  K  + +E
Sbjct: 1067 --NGLQKESVNLLVGLLRDGLQPDHFTLASVLKACSSLTEGLFLSKQIHVYVTKTSIIAE 1124

Query: 359  MLISGALVNTYIKFGKGREARMMFDEMAEYDRDVVLWNMMLRAYVKMG 502
              +S AL++ Y + G   EA  +F+   ++  D+  WN M+  Y+  G
Sbjct: 1125 NFVSTALIDVYSRSGLMAEAEFIFENKNKF--DLAAWNAMMFGYIICG 1170



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 5/167 (2%)
 Frame = +2

Query: 17   HGYTT-----ADRFLTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGS 181
            H Y T     A+ F++  L+ +YS+ G +  A  +F+     DL  WN+++  Y  C   
Sbjct: 1113 HVYVTKTSIIAENFVSTALIDVYSRSGLMAEAEFIFENKNKFDLAAWNAMMFGYIIC--- 1169

Query: 182  HLGNVEEGXXXXXXXXXXXXXXXTKLTLAPVLKLCSMSSYVWASEAVHGYAAKLGLESEM 361
              G+ ++G                + TLA   K C     +   + +H  A K GL S++
Sbjct: 1170 --GDHDKGLKLFAFMHEKGESCD-EYTLATAAKACGSLVRLEQGKQIHALAIKFGLNSDL 1226

Query: 362  LISGALVNTYIKFGKGREARMMFDEMAEYDRDVVLWNMMLRAYVKMG 502
             +S  +++ YIK G   +  ++FD +     D V W +M+   V+ G
Sbjct: 1227 FLSSGILDMYIKCGNMEDGHLLFDNIPV--PDDVAWTIMISGCVENG 1271


>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  176 bits (447), Expect = 1e-42
 Identities = 90/160 (56%), Positives = 115/160 (71%)
 Frame = +2

Query: 26   TTADRFLTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGSHLGNVEEG 205
            +  D FL+NNL++MYSKCGSL SARQ+FD  P RDLVTWN+IL AYA+   S+ GN +EG
Sbjct: 652  SAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEG 711

Query: 206  XXXXXXXXXXXXXXXTKLTLAPVLKLCSMSSYVWASEAVHGYAAKLGLESEMLISGALVN 385
                           T++TLAPVLKLC  S  +WA+E VHGYA K+GLE ++ +SGALVN
Sbjct: 712  LHLFRLLRASLGST-TRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVN 770

Query: 386  TYIKFGKGREARMMFDEMAEYDRDVVLWNMMLRAYVKMGV 505
             Y K G+ R+AR++FD M E  RDVVLWNMML+ YV++G+
Sbjct: 771  IYSKCGRMRDARLLFDWMRE--RDVVLWNMMLKGYVQLGL 808



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
 Frame = +2

Query: 5    VVIKHGYTTADRFLTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGSH 184
            + +K G  + D  + N+LV+MYSK G  + AR++F+ M H DL++WNS++++ A      
Sbjct: 929  IAVKSGLDS-DVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ----- 982

Query: 185  LGNVEEGXXXXXXXXXXXXXXXTKLTLAPVLKLC-SMSSYVWASEAVHGYAAKLGLESEM 361
              ++EE                   TLA VL+ C S+   +  S  +H +A K G  ++ 
Sbjct: 983  -SSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADS 1041

Query: 362  LISGALVNTYIKFGKGREARMMFDEMAEYDRDVVLWNMMLRAYV 493
             ++  L++ Y K GK  EA  +F    + D D+  WN M+  Y+
Sbjct: 1042 FVATTLIDVYSKSGKMEEAEFLFQN--KDDLDLACWNAMMFGYI 1083



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/157 (25%), Positives = 69/157 (43%)
 Frame = +2

Query: 32   ADRFLTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGSHLGNVEEGXX 211
            AD F+   L+ +YSK G +  A  LF      DL  WN+++  Y       +GN  +   
Sbjct: 1039 ADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYI------IGNDGKKAL 1092

Query: 212  XXXXXXXXXXXXXTKLTLAPVLKLCSMSSYVWASEAVHGYAAKLGLESEMLISGALVNTY 391
                          ++TLA   K C     +   + +H +A K G +S++ ++  +++ Y
Sbjct: 1093 ELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMY 1152

Query: 392  IKFGKGREARMMFDEMAEYDRDVVLWNMMLRAYVKMG 502
            IK G    A ++F+ ++    D V W  M+   V  G
Sbjct: 1153 IKCGDMVNAGIVFNYISA--PDDVAWTSMISGCVDNG 1187


>emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  176 bits (447), Expect = 1e-42
 Identities = 90/160 (56%), Positives = 115/160 (71%)
 Frame = +2

Query: 26  TTADRFLTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGSHLGNVEEG 205
           +  D FL+NNL++MYSKCGSL SARQ+FD  P RDLVTWN+IL AYA+   S+ GN +EG
Sbjct: 108 SAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEG 167

Query: 206 XXXXXXXXXXXXXXXTKLTLAPVLKLCSMSSYVWASEAVHGYAAKLGLESEMLISGALVN 385
                          T++TLAPVLKLC  S  +WA+E VHGYA K+GLE ++ +SGALVN
Sbjct: 168 LHLFRLLRASLGST-TRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVN 226

Query: 386 TYIKFGKGREARMMFDEMAEYDRDVVLWNMMLRAYVKMGV 505
            Y K G+ R+AR++FD M E  RDVVLWNMML+ YV++G+
Sbjct: 227 IYSKCGRMRDARLLFDWMRE--RDVVLWNMMLKGYVQLGL 264



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 12/167 (7%)
 Frame = +2

Query: 17  HGYTTA-----DRFLTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGS 181
           HGY        D F++  LV++YSKCG +  AR LFD M  RD+V WN +L  Y      
Sbjct: 206 HGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL--- 262

Query: 182 HLGNVEEGXXXXXXXXXXXXXXXTKLTLAPVLKLCSMSSYVWAS-------EAVHGYAAK 340
               +E+                 + ++  +L  C     +WA        + VHG A K
Sbjct: 263 ---GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGC-----LWAGTDDLELGKQVHGIAVK 314

Query: 341 LGLESEMLISGALVNTYIKFGKGREARMMFDEMAEYDRDVVLWNMML 481
            GL+S++ ++ +LVN Y K G    AR +F++M     D++ WN M+
Sbjct: 315 SGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHL--DLISWNSMI 359



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
 Frame = +2

Query: 5   VVIKHGYTTADRFLTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGSH 184
           + +K G  + D  + N+LV+MYSK G  + AR++F+ M H DL++WNS++   +SC  S 
Sbjct: 311 IAVKSGLDS-DVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMI---SSCAQSS 366

Query: 185 LGNVEEGXXXXXXXXXXXXXXXT--KLTLAPVLKLCSMSSYVWASEAVHGYAAKLGLESE 358
           L                     T   +TLA   K C     +   + +H +A K G +S+
Sbjct: 367 LEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSD 426

Query: 359 MLISGALVNTYIKFGKGREARMMFDEMAEYDRDVVLWNMMLRAYVKMG 502
           + ++  +++ YIK G    A ++F+ ++    D V W  M+   V  G
Sbjct: 427 LHVNSGILDMYIKCGDMVNAGIVFNYISA--PDDVAWTSMISGCVDNG 472


>ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g33170 gi|4455331|emb|CAB36791.1| putative protein
           [Arabidopsis thaliana] gi|7270265|emb|CAB80034.1|
           putative protein [Arabidopsis thaliana]
           gi|332660786|gb|AEE86186.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  169 bits (427), Expect = 3e-40
 Identities = 83/156 (53%), Positives = 113/156 (72%)
 Frame = +2

Query: 35  DRFLTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGSHLGNVEEGXXX 214
           +RFL NNL+SMYSKCGSL  AR++FD MP RDLV+WNSILAAYA      + N+++    
Sbjct: 73  ERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLL 132

Query: 215 XXXXXXXXXXXXTKLTLAPVLKLCSMSSYVWASEAVHGYAAKLGLESEMLISGALVNTYI 394
                       +++TL+P+LKLC  S YVWASE+ HGYA K+GL+ +  ++GALVN Y+
Sbjct: 133 FRILRQDVVYT-SRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYL 191

Query: 395 KFGKGREARMMFDEMAEYDRDVVLWNMMLRAYVKMG 502
           KFGK +E +++F+EM    RDVVLWN+ML+AY++MG
Sbjct: 192 KFGKVKEGKVLFEEMPY--RDVVLWNLMLKAYLEMG 225



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
 Frame = +2

Query: 44  LTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGSHLGNVEEGXXXXXX 223
           ++N+L++MY K      AR +FD M  RDL++WNS++A  A         +E        
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ------NGLEVEAVCLFM 405

Query: 224 XXXXXXXXXTKLTLAPVLKLC-SMSSYVWASEAVHGYAAKLGLESEMLISGALVNTYIKF 400
                     + T+  VLK   S+   +  S+ VH +A K+   S+  +S AL++ Y + 
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRN 465

Query: 401 GKGREARMMFDEMAEYDRDVVLWNMMLRAYVK 496
              +EA ++F+    ++ D+V WN M+  Y +
Sbjct: 466 RCMKEAEILFE---RHNFDLVAWNAMMAGYTQ 494



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/157 (26%), Positives = 67/157 (42%)
 Frame = +2

Query: 32  ADRFLTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGSHLGNVEEGXX 211
           +D F++  L+  YS+   +  A  LF+   + DLV WN+++A Y   H  H         
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHK------TL 502

Query: 212 XXXXXXXXXXXXXTKLTLAPVLKLCSMSSYVWASEAVHGYAAKLGLESEMLISGALVNTY 391
                           TLA V K C     +   + VH YA K G + ++ +S  +++ Y
Sbjct: 503 KLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMY 562

Query: 392 IKFGKGREARMMFDEMAEYDRDVVLWNMMLRAYVKMG 502
           +K G    A+  FD +     D V W  M+   ++ G
Sbjct: 563 VKCGDMSAAQFAFDSIPV--PDDVAWTTMISGCIENG 597


>ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313032|gb|EFH43455.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 997

 Score =  167 bits (422), Expect = 1e-39
 Identities = 85/156 (54%), Positives = 112/156 (71%)
 Frame = +2

Query: 35  DRFLTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGSHLGNVEEGXXX 214
           +RFL NNL+SMYSKCGSL  AR++FD MP RDLV+WNSILAAYA      + NV+E    
Sbjct: 80  ERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLL 139

Query: 215 XXXXXXXXXXXXTKLTLAPVLKLCSMSSYVWASEAVHGYAAKLGLESEMLISGALVNTYI 394
                       +++TL+P+LKLC  S YV ASE+ HGYA K+GL+ +  ++GALVN Y+
Sbjct: 140 FRILRQDVVYT-SRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYL 198

Query: 395 KFGKGREARMMFDEMAEYDRDVVLWNMMLRAYVKMG 502
           KFGK +E R++F+EM    RDVVLWN+ML+AY++MG
Sbjct: 199 KFGKVKEGRVLFEEMPY--RDVVLWNLMLKAYLEMG 232



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 41/157 (26%), Positives = 67/157 (42%)
 Frame = +2

Query: 32  ADRFLTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGSHLGNVEEGXX 211
           AD F++  L+  YS+   +  A  LF    + DLV WN++++ Y   H  H         
Sbjct: 457 ADSFVSTALIDAYSRNRCMKEAEVLFG-RNNFDLVAWNAMMSGYTQSHDGHK------TL 509

Query: 212 XXXXXXXXXXXXXTKLTLAPVLKLCSMSSYVWASEAVHGYAAKLGLESEMLISGALVNTY 391
                           TLA VLK C     +   + VH YA K G + ++ +S  +++ Y
Sbjct: 510 ELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMY 569

Query: 392 IKFGKGREARMMFDEMAEYDRDVVLWNMMLRAYVKMG 502
           +K G    A+  FD +     D V W  ++   ++ G
Sbjct: 570 VKCGDMSAAQFAFDSIPV--PDDVAWTTLISGCIENG 604



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
 Frame = +2

Query: 44  LTNNLVSMYSKCGSLHSARQLFDVMPHRDLVTWNSILAAYASCHGSHLGNVEEGXXXXXX 223
           ++N+L++MY K   +  AR +F+ M  RDL++WNS++A  A        ++E        
Sbjct: 359 VSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQ------SDLEVEAVCLFM 412

Query: 224 XXXXXXXXXTKLTLAPVLKLC-SMSSYVWASEAVHGYAAKLGLESEMLISGALVNTYIKF 400
                       T+  VLK   S+   +  S+ +H +A K    ++  +S AL++ Y + 
Sbjct: 413 QLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRN 472

Query: 401 GKGREARMMFDEMAEYDRDVVLWNMMLRAYVK 496
              +EA ++F      + D+V WN M+  Y +
Sbjct: 473 RCMKEAEVLF---GRNNFDLVAWNAMMSGYTQ 501