BLASTX nr result

ID: Atractylodes21_contig00042002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042002
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282201.1| PREDICTED: short-chain type dehydrogenase/re...    99   5e-19
dbj|BAE46415.1| short chain dehydrogenase [Solanum tuberosum]          98   8e-19
ref|NP_197322.2| Rossmann-fold NAD(P)-binding domain-containing ...    97   1e-18
dbj|BAB09479.1| Brn1-like protein [Arabidopsis thaliana]               97   1e-18
ref|XP_002871809.1| hypothetical protein ARALYDRAFT_909830 [Arab...    96   4e-18

>ref|XP_002282201.1| PREDICTED: short-chain type dehydrogenase/reductase-like [Vitis
           vinifera]
          Length = 258

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 57/120 (47%), Positives = 73/120 (60%), Gaps = 10/120 (8%)
 Frame = -2

Query: 330 LQDRXXXXXXXXXXXXXXXXVHLASLGAKLVIS--------DLVTSELTPILS--STGAV 181
           LQDR                +HLASLGAK+VI+        +LV +E+    S  S  A+
Sbjct: 7   LQDRIAIVTGASRGIGRATALHLASLGAKIVINYTSNKAQAELVAAEINSSSSPSSPRAI 66

Query: 180 AFNADISDPAQVKSLFDFAESTFNSPPHILVNCAGIADPTFASISTTPLENFDRIFSVNT 1
              AD+SDP QVKSLFD AE  FNSPPHILVN AG+ D  + +I+ T LE+FD+IFS+N+
Sbjct: 67  ICQADVSDPTQVKSLFDTAEQIFNSPPHILVNSAGVLDAKYPTIANTSLEDFDKIFSINS 126


>dbj|BAE46415.1| short chain dehydrogenase [Solanum tuberosum]
          Length = 261

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 54/96 (56%), Positives = 64/96 (66%), Gaps = 8/96 (8%)
 Frame = -2

Query: 267 HLASLGAKLVIS--------DLVTSELTPILSSTGAVAFNADISDPAQVKSLFDFAESTF 112
           HLASLGAKLVI+        D V S++     S  A+A  A++SDP QVKSLFD AES F
Sbjct: 33  HLASLGAKLVINYTSNSTQADDVVSQINSTSDSPRAIAVKANVSDPDQVKSLFDAAESAF 92

Query: 111 NSPPHILVNCAGIADPTFASISTTPLENFDRIFSVN 4
            SP +ILVNCAG+ D  + SI  TPLE+FDR F VN
Sbjct: 93  QSPVNILVNCAGVLDGKYPSILNTPLEDFDRTFGVN 128


>ref|NP_197322.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana] gi|332005136|gb|AED92519.1| Rossmann-fold
           NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana]
          Length = 277

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 56/103 (54%), Positives = 68/103 (66%), Gaps = 14/103 (13%)
 Frame = -2

Query: 267 HLASLGAKLVIS--------DLVTSELTPILSSTG------AVAFNADISDPAQVKSLFD 130
           HLA LGAK+VI+        D V +E+    SS G      AV F ADIS+P+Q+KSLFD
Sbjct: 29  HLAELGAKIVINYTTRSTEADQVAAEIN---SSAGTVPQPIAVVFLADISEPSQIKSLFD 85

Query: 129 FAESTFNSPPHILVNCAGIADPTFASISTTPLENFDRIFSVNT 1
            AE  FNSP HILVN AGI +P + +I+ TP+E FDRIF VNT
Sbjct: 86  AAEKAFNSPVHILVNSAGILNPNYPTIANTPIEEFDRIFKVNT 128


>dbj|BAB09479.1| Brn1-like protein [Arabidopsis thaliana]
          Length = 261

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 56/103 (54%), Positives = 68/103 (66%), Gaps = 14/103 (13%)
 Frame = -2

Query: 267 HLASLGAKLVIS--------DLVTSELTPILSSTG------AVAFNADISDPAQVKSLFD 130
           HLA LGAK+VI+        D V +E+    SS G      AV F ADIS+P+Q+KSLFD
Sbjct: 29  HLAELGAKIVINYTTRSTEADQVAAEIN---SSAGTVPQPIAVVFLADISEPSQIKSLFD 85

Query: 129 FAESTFNSPPHILVNCAGIADPTFASISTTPLENFDRIFSVNT 1
            AE  FNSP HILVN AGI +P + +I+ TP+E FDRIF VNT
Sbjct: 86  AAEKAFNSPVHILVNSAGILNPNYPTIANTPIEEFDRIFKVNT 128


>ref|XP_002871809.1| hypothetical protein ARALYDRAFT_909830 [Arabidopsis lyrata subsp.
           lyrata] gi|297317646|gb|EFH48068.1| hypothetical protein
           ARALYDRAFT_909830 [Arabidopsis lyrata subsp. lyrata]
          Length = 264

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 55/103 (53%), Positives = 68/103 (66%), Gaps = 14/103 (13%)
 Frame = -2

Query: 267 HLASLGAKLVIS--------DLVTSELTPILSSTGA------VAFNADISDPAQVKSLFD 130
           HLA LGAK+VI+        D V +E+    SS GA        F+ADIS+P+QVKSLFD
Sbjct: 32  HLAELGAKIVINYTTRSTEADQVAAEIN---SSAGAGQEPIAFVFHADISEPSQVKSLFD 88

Query: 129 FAESTFNSPPHILVNCAGIADPTFASISTTPLENFDRIFSVNT 1
            AE  FNSP HILVN AGI +P + +I+ TP+ +FDRIF VNT
Sbjct: 89  AAEKAFNSPVHILVNSAGILNPNYPTIANTPIADFDRIFKVNT 131


Top