BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041999
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                50   9e-08
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...    54   5e-07
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    50   8e-06
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    52   8e-06

>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 50.4 bits (119), Expect(2) = 9e-08
 Identities = 30/66 (45%), Positives = 39/66 (59%)
 Frame = -3

Query: 200 CMFFADDIVLVKEMRGGELNAKLDQ*RTVSESKGLHISRFKTEYL**NFSGVPNCEGYEV 21
           CM FADDIVL+ E R   +NA+L+  R   ESKG  +SR KTEYL   FS   +    EV
Sbjct: 434 CMLFADDIVLIDETRD-RVNARLEVWRQTLESKGFRLSRTKTEYLGCKFSDGLDETDVEV 492

Query: 20  NIGGEM 3
            +  ++
Sbjct: 493 RLAAQV 498



 Score = 30.4 bits (67), Expect(2) = 9e-08
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 280 KGLMLSLFLFAVTLDEILREAQERMP 203
           +G +LS FLFA+ +DE+ R  QE +P
Sbjct: 407 QGSVLSPFLFALVMDELTRSIQETVP 432


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score = 54.3 bits (129), Expect(2) = 5e-07
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -3

Query: 200 CMFFADDIVLVKEMRGGELNAKLDQ*RTVSESKGLHISRFKTEYL**NFS-GVPNCEGYE 24
           CM FADD+VLV + R G +N KL+  R + ESKG  +SR KTEY+   FS   P  E  E
Sbjct: 308 CMLFADDVVLVDDSRTG-VNRKLELWRQILESKGFRLSRTKTEYMKCGFSTTTPEEEEEE 366

Query: 23  VNIGGEM 3
           V++ G++
Sbjct: 367 VSLDGQV 373



 Score = 24.3 bits (51), Expect(2) = 5e-07
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 280 KGLMLSLFLFAVTLDEILREAQERMP 203
           +G  LS +LF + +DE+ R+ Q  +P
Sbjct: 281 QGSALSPYLFDLVMDEVTRDIQGDIP 306


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score = 50.1 bits (118), Expect(2) = 8e-06
 Identities = 32/65 (49%), Positives = 40/65 (61%)
 Frame = -3

Query: 200 CMFFADDIVLVKEMRGGELNAKLDQ*RTVSESKGLHISRFKTEYL**NFSGVPNCEGYEV 21
           CM FA DIVL+ E + G +NAKL+  R V ESKGL +SR KTEY+   FS   +     V
Sbjct: 394 CMLFAYDIVLIDETQEG-VNAKLNLWREVLESKGLCLSRSKTEYMECKFSANGSQNELGV 452

Query: 20  NIGGE 6
            IG +
Sbjct: 453 RIGDQ 457



 Score = 24.3 bits (51), Expect(2) = 8e-06
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 280 KGLMLSLFLFAVTLDEILREAQERMP 203
           +G  LS +LFA+ +DE+    Q+ +P
Sbjct: 367 QGSSLSPYLFALVMDELTGHIQDDIP 392


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 51.6 bits (122), Expect(2) = 8e-06
 Identities = 29/63 (46%), Positives = 39/63 (61%)
 Frame = -3

Query: 200 CMFFADDIVLVKEMRGGELNAKLDQ*RTVSESKGLHISRFKTEYL**NFSGVPNCEGYEV 21
           CM FADD+VLV E R  E+N +L+  R   E+ G  +SR KT+Y+  NFSG  +    EV
Sbjct: 372 CMLFADDVVLVGESRE-EVNGRLETWRQALEAYGFRLSRSKTKYMECNFSGRRSRSTLEV 430

Query: 20  NIG 12
            +G
Sbjct: 431 KVG 433



 Score = 22.7 bits (47), Expect(2) = 8e-06
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 280 KGLMLSLFLFAVTLDEILREAQERMPR 200
           +G  L+ +LF + LD +    QE  PR
Sbjct: 345 QGSTLTPYLFTLVLDVLTEHIQELAPR 371