BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041985
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...    91   1e-25
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...    85   3e-22
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]          84   7e-22
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...    82   2e-21
emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]         84   3e-21

>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score = 90.5 bits (223), Expect(2) = 1e-25
 Identities = 45/92 (48%), Positives = 61/92 (66%)
 Frame = +2

Query: 143  RKDRFPAKRRSKLSPRSDGPFKVLARVNDNAYKVSLPGTPKEAATFNVADIEPYYDPADP 322
            RKDRFP  R+SKL PR+DGPFKVL ++NDNAYK+ LP     + TFN+AD++PY    D 
Sbjct: 1532 RKDRFPNLRKSKLMPRADGPFKVLEKINDNAYKLELPADFGVSPTFNIADLKPYLGEEDE 1591

Query: 323  IPSLRANFSEVGEEDDRQAPTDPSDMIDPNPP 418
            +PS   +F E GE+D+     D + ++ P  P
Sbjct: 1592 LPSRTTSFQE-GEDDE-----DINTIVTPTAP 1617



 Score = 51.6 bits (122), Expect(2) = 1e-25
 Identities = 23/50 (46%), Positives = 31/50 (62%)
 Frame = +3

Query: 18   IKSLHQHVHDKITKSNELLKYRRDKGRKHILFQPGDLVWVHFARTGFQPN 167
            I  +H+   + I + N   K  RDKGRKH++F PGDLVW+H  +  F PN
Sbjct: 1490 ILKIHELTKENIERMNAKYKLARDKGRKHVVFAPGDLVWLHLRKDRF-PN 1538


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score = 85.1 bits (209), Expect(2) = 3e-22
 Identities = 44/92 (47%), Positives = 56/92 (60%)
 Frame = +2

Query: 143  RKDRFPAKRRSKLSPRSDGPFKVLARVNDNAYKVSLPGTPKEAATFNVADIEPYYDPADP 322
            RKDRFP  R+SKL PR+DGPFKVL ++NDNAYK+ LP     + TFN+AD++PY    D 
Sbjct: 1516 RKDRFPNLRKSKLLPRADGPFKVLQKINDNAYKLELPADFGVSPTFNIADLKPYLGEEDE 1575

Query: 323  IPSLRANFSEVGEEDDRQAPTDPSDMIDPNPP 418
            + S      E GE+D+     D S  I    P
Sbjct: 1576 LESRTTQMQE-GEDDEDIPSNDTSTPIAQQGP 1606



 Score = 45.4 bits (106), Expect(2) = 3e-22
 Identities = 20/47 (42%), Positives = 28/47 (59%)
 Frame = +3

Query: 27   LHQHVHDKITKSNELLKYRRDKGRKHILFQPGDLVWVHFARTGFQPN 167
            LH+   + I + N   K    KG+KH+ F+PGDLVW+H  +  F PN
Sbjct: 1477 LHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRF-PN 1522


>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
          Length = 1170

 Score = 84.0 bits (206), Expect(2) = 7e-22
 Identities = 43/92 (46%), Positives = 56/92 (60%)
 Frame = +2

Query: 143  RKDRFPAKRRSKLSPRSDGPFKVLARVNDNAYKVSLPGTPKEAATFNVADIEPYYDPADP 322
            RKDRFP  R+SKL PR+DGPFKVL ++NDNAYK+ LP     + TFN+AD++PY    D 
Sbjct: 1004 RKDRFPNLRKSKLLPRADGPFKVLQKINDNAYKLELPADFGVSPTFNIADLKPYLGEEDE 1063

Query: 323  IPSLRANFSEVGEEDDRQAPTDPSDMIDPNPP 418
            + S      E GE+D+     D +  I    P
Sbjct: 1064 LESRTTQMQE-GEDDEDIPSNDTTTPIAQQGP 1094



 Score = 45.4 bits (106), Expect(2) = 7e-22
 Identities = 20/47 (42%), Positives = 28/47 (59%)
 Frame = +3

Query: 27   LHQHVHDKITKSNELLKYRRDKGRKHILFQPGDLVWVHFARTGFQPN 167
            LH+   + I + N   K    KG+KH+ F+PGDLVW+H  +  F PN
Sbjct: 965  LHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRF-PN 1010


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score = 82.4 bits (202), Expect(2) = 2e-21
 Identities = 42/92 (45%), Positives = 55/92 (59%)
 Frame = +2

Query: 143  RKDRFPAKRRSKLSPRSDGPFKVLARVNDNAYKVSLPGTPKEAATFNVADIEPYYDPADP 322
            RKDRFP  R+SKL PR+DGPFKVL ++NDN YK+ LP     + TFN+AD++PY    D 
Sbjct: 1516 RKDRFPNLRKSKLLPRADGPFKVLQKINDNTYKLELPADFGVSPTFNIADLKPYLGEEDE 1575

Query: 323  IPSLRANFSEVGEEDDRQAPTDPSDMIDPNPP 418
            + S      E GE+D+     D +  I    P
Sbjct: 1576 LESRTTQMQE-GEDDEDIPSNDTTTPIAQQGP 1606



 Score = 45.4 bits (106), Expect(2) = 2e-21
 Identities = 20/47 (42%), Positives = 28/47 (59%)
 Frame = +3

Query: 27   LHQHVHDKITKSNELLKYRRDKGRKHILFQPGDLVWVHFARTGFQPN 167
            LH+   + I + N   K    KG+KH+ F+PGDLVW+H  +  F PN
Sbjct: 1477 LHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRF-PN 1522


>emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]
          Length = 1239

 Score = 84.0 bits (206), Expect(2) = 3e-21
 Identities = 43/92 (46%), Positives = 56/92 (60%)
 Frame = +2

Query: 143  RKDRFPAKRRSKLSPRSDGPFKVLARVNDNAYKVSLPGTPKEAATFNVADIEPYYDPADP 322
            RKDRFP  R+SKL PR+DGPFKVL ++NDNAYK+ LP     + TFN+AD++PY    D 
Sbjct: 1109 RKDRFPNLRKSKLLPRADGPFKVLQKINDNAYKLELPADFGVSPTFNIADLKPYLGEEDE 1168

Query: 323  IPSLRANFSEVGEEDDRQAPTDPSDMIDPNPP 418
            + S      E GE+D+     D +  I    P
Sbjct: 1169 LESRTTQMQE-GEDDEDIPSNDTTTPIAQQGP 1199



 Score = 43.5 bits (101), Expect(2) = 3e-21
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = +3

Query: 27   LHQHVHDKITKSNELLKYRRDKGRKHILFQPGDLVWVHFARTGFQPN 167
            LH+   + I + N   K    KG+KH+ F+PG+LVW+H  +  F PN
Sbjct: 1070 LHETTKENIERMNIKYKLAGSKGKKHVAFEPGNLVWLHLRKDRF-PN 1115