BLASTX nr result

ID: Atractylodes21_contig00041927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041927
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    98   6e-19
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    94   9e-18
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    93   3e-17
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    76   2e-12
gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp...    72   5e-11

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 39/58 (67%), Positives = 53/58 (91%)
 Frame = -3

Query: 175 GGSNWRFRKLDMPLFDGNNPDGWILRAERYFTFYRLGEEEKMEAAIVAMEGDALLWFQ 2
           GG +WR +KLD+P+F GNNPDGWI+RAER+F FYRL E+EK+EAA+V+++G+ALLW+Q
Sbjct: 93  GGGSWRAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVSLDGEALLWYQ 150


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 38/58 (65%), Positives = 49/58 (84%)
 Frame = -3

Query: 175 GGSNWRFRKLDMPLFDGNNPDGWILRAERYFTFYRLGEEEKMEAAIVAMEGDALLWFQ 2
           GG  W+ ++LD+P+F G NPDGWILR ERYF FYRL  EE++EAA+VA++G+ALLWFQ
Sbjct: 73  GGGGWKAKRLDLPIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVVALDGEALLWFQ 130


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 40/57 (70%), Positives = 46/57 (80%)
 Frame = -3

Query: 172 GSNWRFRKLDMPLFDGNNPDGWILRAERYFTFYRLGEEEKMEAAIVAMEGDALLWFQ 2
           G NWR +KLDMP FD  +PDGWILR ER+F FY L + EKMEAA+VAMEGDAL W+Q
Sbjct: 169 GGNWRHKKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEGDALRWYQ 225


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 33/59 (55%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
 Frame = -3

Query: 175 GGSNWR-FRKLDMPLFDGNNPDGWILRAERYFTFYRLGEEEKMEAAIVAMEGDALLWFQ 2
           G   WR  R+++MP+F G NPDGWI RA+RYF  Y L EEEK+ AA ++++GDAL W+Q
Sbjct: 763 GNGEWRGSRRVEMPVFTGENPDGWIFRADRYFATYGLTEEEKLVAAAMSLDGDALSWYQ 821


>gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp. melo]
          Length = 473

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 30/58 (51%), Positives = 43/58 (74%)
 Frame = -3

Query: 175 GGSNWRFRKLDMPLFDGNNPDGWILRAERYFTFYRLGEEEKMEAAIVAMEGDALLWFQ 2
           G    +F+KL+MP+F+G +PDGWI +AE YF  + L E+EK++ AIV+MEG  L WF+
Sbjct: 90  GQDRIKFKKLEMPVFNGEDPDGWIYKAEYYFQMHLLNEQEKLKIAIVSMEGKGLCWFR 147


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