BLASTX nr result

ID: Atractylodes21_contig00041922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041922
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529510.1| pentatricopeptide repeat-containing protein,...   150   4e-34
emb|CBI29825.3| unnamed protein product [Vitis vinifera]              148   1e-33
ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi...   148   1e-33
ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|2...   124   2e-26
ref|XP_002889252.1| pentatricopeptide repeat-containing protein ...   113   4e-23

>ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531026|gb|EEF32879.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 804

 Score =  150 bits (378), Expect = 4e-34
 Identities = 77/140 (55%), Positives = 99/140 (70%), Gaps = 12/140 (8%)
 Frame = -2

Query: 737  KGEVERAVRLLLDMDIKLGEFDLAPYTIWLIGFCQARKTEKALKLFDILKEFYINVTPPR 558
            KGEVE AVR LL+MD KL +F LAPYTIWLIG CQA + E+ALK+F  L+E  + VTPP 
Sbjct: 641  KGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPS 700

Query: 557  ------------KLKLAVEVFLYSLEKGFILKPRICNNLLKSLLRSQYETEHAFDLIKKM 414
                         L LA E+FLY+++KG++L PRICN LLKSLLRS+ +   AFDL+ +M
Sbjct: 701  CVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKSLLRSEDKRNRAFDLLSRM 760

Query: 413  ESCGYDLDAYLDAGTRLLLR 354
            +S GYDLD++L   T+ LL+
Sbjct: 761  KSLGYDLDSHLHQTTKFLLQ 780


>emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  148 bits (374), Expect = 1e-33
 Identities = 77/152 (50%), Positives = 106/152 (69%), Gaps = 12/152 (7%)
 Frame = -2

Query: 737  KGEVERAVRLLLDMDIKLGEFDLAPYTIWLIGFCQARKTEKALKLFDILKEFYINVTPPR 558
            KGE+E+AVR LL+M+ KL  F++APYTIWLIG CQAR++E+ALK+F +LKE  ++V PP 
Sbjct: 570  KGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPS 629

Query: 557  ------------KLKLAVEVFLYSLEKGFILKPRICNNLLKSLLRSQYETEHAFDLIKKM 414
                         L++AV++FLY+LEKGF+L PRICN LL+SL+  Q + +HA DL+ +M
Sbjct: 630  CVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLI-LQDKMKHALDLLNRM 688

Query: 413  ESCGYDLDAYLDAGTRLLLRSCRRTQDTEIVS 318
             S GYDLD YL    +  L S  + Q+ E V+
Sbjct: 689  NSAGYDLDEYLHHRIKSYLLSVWKAQEMENVA 720


>ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like
            [Vitis vinifera]
          Length = 798

 Score =  148 bits (374), Expect = 1e-33
 Identities = 77/152 (50%), Positives = 106/152 (69%), Gaps = 12/152 (7%)
 Frame = -2

Query: 737  KGEVERAVRLLLDMDIKLGEFDLAPYTIWLIGFCQARKTEKALKLFDILKEFYINVTPPR 558
            KGE+E+AVR LL+M+ KL  F++APYTIWLIG CQAR++E+ALK+F +LKE  ++V PP 
Sbjct: 646  KGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPS 705

Query: 557  ------------KLKLAVEVFLYSLEKGFILKPRICNNLLKSLLRSQYETEHAFDLIKKM 414
                         L++AV++FLY+LEKGF+L PRICN LL+SL+  Q + +HA DL+ +M
Sbjct: 706  CVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLI-LQDKMKHALDLLNRM 764

Query: 413  ESCGYDLDAYLDAGTRLLLRSCRRTQDTEIVS 318
             S GYDLD YL    +  L S  + Q+ E V+
Sbjct: 765  NSAGYDLDEYLHHRIKSYLLSVWKAQEMENVA 796


>ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|222854000|gb|EEE91547.1|
            predicted protein [Populus trichocarpa]
          Length = 789

 Score =  124 bits (311), Expect = 2e-26
 Identities = 67/141 (47%), Positives = 95/141 (67%), Gaps = 14/141 (9%)
 Frame = -2

Query: 737  KGEVERAVRLLLDMDIKLGEFDLAPYTIWLIGFCQARKTEKALKLFDILKEFYINVTPPR 558
            K EVE+AVR LL+MD KL +FDL PY IWLIG CQ R+  +ALK+F IL+E+ + +TPP 
Sbjct: 641  KQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPC 700

Query: 557  KLKL------------AVEVFLYSLEKGFILKPRICNNLLKSLLRSQYE--TEHAFDLIK 420
             +KL            A++VFLY++EKG++L+ R+ N +L  L+R + E   + A  L+ 
Sbjct: 701  CVKLIYFLLKEGDLDRAIDVFLYTIEKGYLLRRRVANRILTKLVRRKGEMGKDRAIYLLC 760

Query: 419  KMESCGYDLDAYLDAGTRLLL 357
            +M+S GYDLDA+L   T+ LL
Sbjct: 761  RMKSVGYDLDAHLLPWTKSLL 781


>ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297335093|gb|EFH65511.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 780

 Score =  113 bits (283), Expect = 4e-23
 Identities = 59/131 (45%), Positives = 83/131 (63%), Gaps = 12/131 (9%)
 Frame = -2

Query: 737  KGEVERAVRLLLDMDIKLGEFDLAPYTIWLIGFCQARKTEKALKLFDILKEFYINVTPPR 558
            +GE ERA+R L+++D +  E  L PYTIWLIG CQ+ +  +AL +F +L+E  I VTPP 
Sbjct: 632  EGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPS 691

Query: 557  KLKL------------AVEVFLYSLEKGFILKPRICNNLLKSLLRSQYETEHAFDLIKKM 414
             +KL            A++VFLY+L+  F L PR+CN LL SLL+S+ + E    L  +M
Sbjct: 692  CVKLIHGLCKREQLDAAIDVFLYTLDNNFKLMPRVCNYLLSSLLQSREKMEIVSQLTNRM 751

Query: 413  ESCGYDLDAYL 381
            E  GYD+D+ L
Sbjct: 752  ERAGYDVDSML 762


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