BLASTX nr result

ID: Atractylodes21_contig00041888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041888
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...    69   5e-10
emb|CBI23315.3| unnamed protein product [Vitis vinifera]               69   5e-10
emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]    69   5e-10
ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein...    58   7e-07
emb|CBI23317.3| unnamed protein product [Vitis vinifera]               58   7e-07

>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = -3

Query: 225 ISWKRLRSLCICDRLLDEDLIENILSGSPLLETLVLNSCYGYRRLDITSKSVKKLVFS-- 52
           ISW  L++L I    L +DLIE ILSG P LE+L L+ C+G   L+ITS S+KKLV +  
Sbjct: 222 ISWPSLKTLSIGSVELCDDLIEEILSGCPALESLELHHCFGINSLNITSASLKKLVINRY 281

Query: 51  -GGGHNELTSIIKINAPN 1
               H+   S++KI+APN
Sbjct: 282 WDSSHSHHRSVLKISAPN 299


>emb|CBI23315.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = -3

Query: 225 ISWKRLRSLCICDRLLDEDLIENILSGSPLLETLVLNSCYGYRRLDITSKSVKKLVFS-- 52
           ISW  L++L I    L +DLIE ILSG P LE+L L+ C+G   L+ITS S+KKLV +  
Sbjct: 130 ISWPSLKTLSIGSVELCDDLIEEILSGCPALESLELHHCFGINSLNITSASLKKLVINRY 189

Query: 51  -GGGHNELTSIIKINAPN 1
               H+   S++KI+APN
Sbjct: 190 WDSSHSHHRSVLKISAPN 207


>emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = -3

Query: 225 ISWKRLRSLCICDRLLDEDLIENILSGSPLLETLVLNSCYGYRRLDITSKSVKKLVFS-- 52
           ISW  L++L I    L +DLIE ILSG P LE+L L+ C+G   L+ITS S+KKLV +  
Sbjct: 222 ISWPSLKTLSIGSVELCDDLIEEILSGCPALESLELHHCFGINSLNITSASLKKLVINRY 281

Query: 51  -GGGHNELTSIIKINAPN 1
               H+   S++KI+APN
Sbjct: 282 WDSSHSHHRSVLKISAPN 299


>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
           vinifera]
          Length = 665

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
 Frame = -3

Query: 231 GEISWKRLRSLCICDRLLDEDLIENILSGSPLLETLVLNSCYGYRRLDITSKSVKKL-VF 55
           G +SW  L+SL I    L+E+ I NIL GSP LE L  + C+G+ R++I S+S+KKL + 
Sbjct: 194 GVVSWAWLKSLSIGYAELNEETIRNILMGSPALECLEFHRCHGFARINICSESLKKLSIL 253

Query: 54  SGGGHN--ELTSIIKINAPN 1
                N  E  ++++++APN
Sbjct: 254 EPWAPNDAEGETVLEVSAPN 273


>emb|CBI23317.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
 Frame = -3

Query: 231 GEISWKRLRSLCICDRLLDEDLIENILSGSPLLETLVLNSCYGYRRLDITSKSVKKL-VF 55
           G +SW  L+SL I    L+E+ I NIL GSP LE L  + C+G+ R++I S+S+KKL + 
Sbjct: 194 GVVSWAWLKSLSIGYAELNEETIRNILMGSPALECLEFHRCHGFARINICSESLKKLSIL 253

Query: 54  SGGGHN--ELTSIIKINAPN 1
                N  E  ++++++APN
Sbjct: 254 EPWAPNDAEGETVLEVSAPN 273


Top