BLASTX nr result

ID: Atractylodes21_contig00041878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041878
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   241   5e-62
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   238   3e-61
gb|ACB28472.1| polyprotein [Ananas comosus]                           234   6e-60
gb|ABD78322.1| polyprotein [Primula vulgaris]                         227   7e-58
emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]   227   7e-58

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  241 bits (615), Expect = 5e-62
 Identities = 114/161 (70%), Positives = 132/161 (81%)
 Frame = -2

Query: 485  PAVFEELNEEFSEVFSDPIGLPPVRGNEHKIDLKHAFEPINVRPYRYPQCQKNEIEKMVK 306
            P   +EL   F  VF  P+GLPP RG+EH I LK    P+ VRPYRYPQ QK+EIE+++K
Sbjct: 653  PPFLQELMRRFEGVFETPVGLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLIK 712

Query: 305  EVLSAGIIRPSHSSFSSPVLLVKKKDGSWRFCIDYRALNKGTVADKFPIPIIDELLDELC 126
            E+L+AGII+PS S FSSPV+LVKKKDGSWRFC+DYRALNK TV DK+PIP+IDELLDEL 
Sbjct: 713  EMLAAGIIQPSTSPFSSPVILVKKKDGSWRFCVDYRALNKETVPDKYPIPVIDELLDELH 772

Query: 125  GAKWFSKLDLKAGYHQIRMREDDVHKTAFRTHEGHYEFLVM 3
            GA  FSKLDL+AGYHQI +R +D HKTAFRTHEGHYEFLVM
Sbjct: 773  GATVFSKLDLRAGYHQILVRPEDTHKTAFRTHEGHYEFLVM 813


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  238 bits (608), Expect = 3e-61
 Identities = 111/161 (68%), Positives = 136/161 (84%)
 Frame = -2

Query: 485  PAVFEELNEEFSEVFSDPIGLPPVRGNEHKIDLKHAFEPINVRPYRYPQCQKNEIEKMVK 306
            P+  + L   + +VF+ P+GLPP RG+ H I+L+H   P++VRPYRYPQ QK+EIE+++ 
Sbjct: 585  PSCLQPLLSSYQQVFNMPLGLPPDRGHVHAINLQHGTNPVSVRPYRYPQSQKDEIEQLIH 644

Query: 305  EVLSAGIIRPSHSSFSSPVLLVKKKDGSWRFCIDYRALNKGTVADKFPIPIIDELLDELC 126
            ++L+AGII+ SHS+FSSPVLLVKKKDGSWRFC+DYRALN  TV DK+PIPIIDELLDEL 
Sbjct: 645  DMLAAGIIQQSHSAFSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKYPIPIIDELLDELH 704

Query: 125  GAKWFSKLDLKAGYHQIRMREDDVHKTAFRTHEGHYEFLVM 3
            GA  FSKLDLK+GYHQI+M+  DVHKTAFRTHEGHYEFLVM
Sbjct: 705  GACVFSKLDLKSGYHQIKMKPSDVHKTAFRTHEGHYEFLVM 745


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  234 bits (597), Expect = 6e-60
 Identities = 110/155 (70%), Positives = 130/155 (83%)
 Frame = -2

Query: 467 LNEEFSEVFSDPIGLPPVRGNEHKIDLKHAFEPINVRPYRYPQCQKNEIEKMVKEVLSAG 288
           L EE S++F +P GLPPVR ++HKI LK    PINVRPYRYP  QK EIEK+V+E+LS G
Sbjct: 197 LLEEHSDLFEEPQGLPPVRLHDHKIPLKEGTNPINVRPYRYPAYQKTEIEKLVQEMLSQG 256

Query: 287 IIRPSHSSFSSPVLLVKKKDGSWRFCIDYRALNKGTVADKFPIPIIDELLDELCGAKWFS 108
           +I PS+S +SSPV+LVKKKDGSWR CIDYR+LN  T+ DKFPIP++DELLDEL GAK FS
Sbjct: 257 VITPSNSPYSSPVVLVKKKDGSWRLCIDYRSLNDSTIKDKFPIPLVDELLDELSGAKLFS 316

Query: 107 KLDLKAGYHQIRMREDDVHKTAFRTHEGHYEFLVM 3
           +LDL++GYHQIRM  DD+ KTAFRTHEGHYEFLVM
Sbjct: 317 ELDLRSGYHQIRMHADDISKTAFRTHEGHYEFLVM 351


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score =  227 bits (579), Expect = 7e-58
 Identities = 108/151 (71%), Positives = 125/151 (82%)
 Frame = -2

Query: 455 FSEVFSDPIGLPPVRGNEHKIDLKHAFEPINVRPYRYPQCQKNEIEKMVKEVLSAGIIRP 276
           F EVFS+P GLPP R + HKI+L     PI+VRPYRYP  QKNEIEK+VKE++ +G IRP
Sbjct: 460 FPEVFSEPKGLPPEREHVHKIELIQGTNPISVRPYRYPYFQKNEIEKIVKELIESGFIRP 519

Query: 275 SHSSFSSPVLLVKKKDGSWRFCIDYRALNKGTVADKFPIPIIDELLDELCGAKWFSKLDL 96
           S S FSSPV+LVKK DGSWR C+DYRALNK T+ DKFPIP++DELLDEL GAK FSKLDL
Sbjct: 520 SQSPFSSPVILVKKSDGSWRMCVDYRALNKVTIKDKFPIPVVDELLDELNGAKLFSKLDL 579

Query: 95  KAGYHQIRMREDDVHKTAFRTHEGHYEFLVM 3
           ++GYHQI+M  +DV KTAFRTHEG YEFLVM
Sbjct: 580 RSGYHQIKMHANDVSKTAFRTHEGQYEFLVM 610


>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score =  227 bits (579), Expect = 7e-58
 Identities = 106/161 (65%), Positives = 132/161 (81%)
 Frame = -2

Query: 485  PAVFEELNEEFSEVFSDPIGLPPVRGNEHKIDLKHAFEPINVRPYRYPQCQKNEIEKMVK 306
            P+   +L  +FS VF  P  LPP R ++HKI L+ +  P++VRPYRYP  QK EIEKMVK
Sbjct: 524  PSKIGQLLAKFSHVFESPTTLPPRRSHDHKIPLQPSAGPVSVRPYRYPYYQKTEIEKMVK 583

Query: 305  EVLSAGIIRPSHSSFSSPVLLVKKKDGSWRFCIDYRALNKGTVADKFPIPIIDELLDELC 126
            E+L +G+IRPS+S FSSP+LLVKK DG+WRFC+DYRALN  T+ DK+PIP+IDELLDEL 
Sbjct: 584  ELLQSGLIRPSNSPFSSPILLVKKADGAWRFCVDYRALNDITIKDKYPIPVIDELLDELH 643

Query: 125  GAKWFSKLDLKAGYHQIRMREDDVHKTAFRTHEGHYEFLVM 3
            GAK++SKLDL++GYHQIR+ E D+ KTAFRTHEGHYEF+VM
Sbjct: 644  GAKFYSKLDLRSGYHQIRVHEADIPKTAFRTHEGHYEFIVM 684


Top