BLASTX nr result

ID: Atractylodes21_contig00041877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041877
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    81   1e-19
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    72   7e-19
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    76   7e-18
ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209...    75   2e-17
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    74   4e-17

>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 80.9 bits (198), Expect(2) = 1e-19
 Identities = 35/66 (53%), Positives = 51/66 (77%)
 Frame = -3

Query: 297  FTVKEGLVWYKGRLVLPHTSTMIKPILDEFHSSLLGGHSGIERTYQRVAAEIFWWGMKMD 118
            +++K+G ++YKGRLVLP TS+++  IL  FH  ++GGHSG  RTY+R+AAE++W GMK D
Sbjct: 841  YSIKQGRLFYKGRLVLPKTSSLLPTILHTFHDLVVGGHSGQLRTYKRIAAELYWEGMKND 900

Query: 117  VKDCAD 100
            +K   D
Sbjct: 901  IKIYVD 906



 Score = 40.0 bits (92), Expect(2) = 1e-19
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -1

Query: 107  VRTCETCQRNKALGGWPRGVLQPLALPLRVWDEVT 3
            V  C  CQ+NK     P G+LQPL +P R+W++++
Sbjct: 905  VDQCPVCQQNKTQALSPAGLLQPLPIPSRIWEDIS 939


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 72.0 bits (175), Expect(2) = 7e-19
 Identities = 32/64 (50%), Positives = 47/64 (73%)
 Frame = -3

Query: 300  GFTVKEGLVWYKGRLVLPHTSTMIKPILDEFHSSLLGGHSGIERTYQRVAAEIFWWGMKM 121
            G+ +K+G++ Y+GRLV+   S MI  +L EFHS+  GGHSG  RTY+R+AA ++W GMK 
Sbjct: 839  GYMLKQGVLLYEGRLVVSSKSVMIPTLLAEFHSTPQGGHSGFYRTYRRLAANVYWVGMKN 898

Query: 120  DVKD 109
             V++
Sbjct: 899  TVQE 902



 Score = 46.6 bits (109), Expect(2) = 7e-19
 Identities = 18/35 (51%), Positives = 27/35 (77%)
 Frame = -1

Query: 107  VRTCETCQRNKALGGWPRGVLQPLALPLRVWDEVT 3
            VR+C+TCQR K L   P G+LQPL +P R+W++++
Sbjct: 904  VRSCDTCQRQKYLASSPGGLLQPLPVPDRIWEDLS 938


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 76.3 bits (186), Expect(2) = 7e-18
 Identities = 34/63 (53%), Positives = 47/63 (74%)
 Frame = -3

Query: 303  KGFTVKEGLVWYKGRLVLPHTSTMIKPILDEFHSSLLGGHSGIERTYQRVAAEIFWWGMK 124
            +GFTV+ GL+ Y GRLV+P    +   +L+E+HSS +GGHSGI +TY+R+A E +W GMK
Sbjct: 1079 QGFTVEHGLLKYNGRLVIPKNVPLTTTLLEEYHSSPMGGHSGIFKTYKRLAGEWYWKGMK 1138

Query: 123  MDV 115
             DV
Sbjct: 1139 KDV 1141



 Score = 38.9 bits (89), Expect(2) = 7e-18
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = -1

Query: 143  YFGGA*KWM*RTVRTCETCQRNKALGGWPRGVLQPLALPLRVWDEVT 3
            Y+ G  K +   V+ C+ CQ+ K     P G+LQPL +PL +W++++
Sbjct: 1133 YWKGMKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDIS 1179


>ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209704 [Cucumis sativus]
          Length = 1503

 Score = 75.5 bits (184), Expect(2) = 2e-17
 Identities = 35/69 (50%), Positives = 45/69 (65%)
 Frame = -3

Query: 318  NHEEHKGFTVKEGLVWYKGRLVLPHTSTMIKPILDEFHSSLLGGHSGIERTYQRVAAEIF 139
            N +E   F    G +WYK R+VL   ST+I  +L  FH S+LGGHSG  RTY+R+  E++
Sbjct: 1291 NPDEPSKFQWVNGNLWYKKRIVLSKESTLIPTLLHTFHDSILGGHSGFLRTYKRMCGELY 1350

Query: 138  WWGMKMDVK 112
            W GMK DVK
Sbjct: 1351 WKGMKADVK 1359



 Score = 38.5 bits (88), Expect(2) = 2e-17
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = -1

Query: 107  VRTCETCQRNKALGGWPRGVLQPLALPLRVWDE 9
            V+ CE CQRNK     P GVLQP+ +P R+ ++
Sbjct: 1362 VQECEVCQRNKLEATKPAGVLQPIPIPERILED 1394


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 73.9 bits (180), Expect(2) = 4e-17
 Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 4/70 (5%)
 Frame = -3

Query: 300  GFTVKEGLVWYKGRLVLPHTSTMIKPILDEFHSSLLGGHSGIERTYQRVAAEIFWWGMKM 121
            GFT ++G++ +KGRLV+P    M   ++ E+H++ +GGHSGI +TYQR+A E FW GMK 
Sbjct: 916  GFTEEQGVLKFKGRLVVPRKVAMTSRLIHEYHATPMGGHSGIFKTYQRLATEWFWKGMKQ 975

Query: 120  DV----KDCA 103
            DV    ++CA
Sbjct: 976  DVITFIQECA 985



 Score = 38.9 bits (89), Expect(2) = 4e-17
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = -1

Query: 107  VRTCETCQRNKALGGWPRGVLQPLALPLRVWDEVT 3
            ++ C  CQ+NK     P G+LQPL +P  +W++V+
Sbjct: 981  IQECAVCQQNKTSSLAPAGLLQPLPIPTLIWEDVS 1015


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