BLASTX nr result

ID: Atractylodes21_contig00041857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041857
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...   112   2e-23
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]   111   5e-23
emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]   111   7e-23
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   110   1e-22
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   110   1e-22

>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/114 (48%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
 Frame = -2

Query: 342  WIQ*VPWAQLWYNTIFHGATGVTPFEIVYGRKPPQLVRWQ-GETLVERVATELVNRDETL 166
            W + + WA+LWYNT FH A   TPF++VYGR+PP +VR++ G T    +   L  RD  L
Sbjct: 2466 WHKFLSWAELWYNTSFHTALKATPFQVVYGREPPAIVRFEEGSTNNYDLEMALRERDAML 2525

Query: 165  *QLKYHLLRGQQQMKKFTDRKRKDGEFEIGEWVFFKLRPHRQQTVARRIYQKLA 4
             Q++ HLLR Q  MK   D+ R++  F +G+WV+ KL+P RQ TV RR  QKLA
Sbjct: 2526 VQIQQHLLRAQHLMKASADKHRRELSFAVGDWVYLKLKPFRQHTVVRRYCQKLA 2579


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score =  111 bits (278), Expect = 5e-23
 Identities = 48/114 (42%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
 Frame = -2

Query: 342  WIQ*VPWAQLWYNTIFHGATGVTPFEIVYGRKPPQLVRWQ-GETLVERVATELVNRDETL 166
            W   +PWA+ WYNT +H +TG+TPF+ +YGR PP +  ++ G   +E +  ++  R+E L
Sbjct: 1105 WNSLLPWAEYWYNTTYHSSTGMTPFQALYGRPPPAIPSYEIGSCPIEELDDQMTARNELL 1164

Query: 165  *QLKYHLLRGQQQMKKFTDRKRKDGEFEIGEWVFFKLRPHRQQTVARRIYQKLA 4
             +LK HL     +MK+  D+KR++  FE+G+WV+ +L+P+RQQ+V RR   KL+
Sbjct: 1165 QELKAHLHAANNRMKQAADKKRREVNFEVGDWVYLRLQPYRQQSVFRRTSHKLS 1218


>emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]
          Length = 1259

 Score =  111 bits (277), Expect = 7e-23
 Identities = 48/114 (42%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
 Frame = -2

Query: 342  WIQ*VPWAQLWYNTIFHGATGVTPFEIVYGRKPPQLVRWQ-GETLVERVATELVNRDETL 166
            W   +PWA+ WYNT +H +TG+TPF+ +YG  PP +  ++ G   +E +  ++  RDE L
Sbjct: 1076 WNSLLPWAEYWYNTTYHSSTGMTPFQALYGXPPPAIPSYEIGSCPIEELDDQMTARDELL 1135

Query: 165  *QLKYHLLRGQQQMKKFTDRKRKDGEFEIGEWVFFKLRPHRQQTVARRIYQKLA 4
             +LK HL     +MK+  D+KR++  FE+G+WV+ +L+P+RQQ+V RR   KL+
Sbjct: 1136 QELKAHLHAANNRMKQAADKKRREVNFEVGDWVYLRLQPYRQQSVFRRTSHKLS 1189


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  110 bits (275), Expect = 1e-22
 Identities = 55/115 (47%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
 Frame = -2

Query: 342  WIQ*VPWAQLWYNTIFHGATGVTPFEIVYGRKPP-QLVRWQGETLVERVATELVNRDETL 166
            W + +  A+ WYNT +H ++ +TPFEIVYG+ PP  L    GE+ V  VA  L  R++ L
Sbjct: 1276 WSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLPGESKVAVVARSLQEREDML 1335

Query: 165  *QLKYHLLRGQQQMKKFTDRKRKDGEFEIGEWVFFKLRPHRQQTVARRIYQKLAP 1
              LK+HL+R Q +MK+F D+ R + EFEIG++V+ KL+P+RQQ+V  R  QKL+P
Sbjct: 1336 LFLKFHLMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQKLSP 1390


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/115 (48%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
 Frame = -2

Query: 342  WIQ*VPWAQLWYNTIFHGATGVTPFEIVYGRKPPQLVRWQGETLVERVATE--LVNRDET 169
            W Q +PWA+ WYNT +H AT  TPF+ VYGR+PP L+R+ G+        E  L +RD  
Sbjct: 1391 WFQWLPWAEYWYNTSYHSATKTTPFQAVYGREPPVLLRY-GDIPTNNANVEELLKDRDGM 1449

Query: 168  L*QLKYHLLRGQQQMKKFTDRKRKDGEFEIGEWVFFKLRPHRQQTVARRIYQKLA 4
            L +L+ +L   Q QMKK  D+ R+D  FEI EWV+ KLRP+RQ +VA R  +KL+
Sbjct: 1450 LVELRENLEIAQAQMKKAADKSRRDVAFEIDEWVYLKLRPYRQSSVAHRKNEKLS 1504


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