BLASTX nr result

ID: Atractylodes21_contig00041816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041816
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H...   115   5e-24
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   108   3e-22
ref|XP_004169413.1| PREDICTED: uncharacterized protein LOC101228...    90   2e-16
ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211...    90   2e-16
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    88   8e-16

>gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 657

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 4/108 (3%)
 Frame = +2

Query: 5   NLAKSTYEKELMALVLAIQHWRPYLISRVFT*----KSLRHLLQQRIVSAD*QNRVAKLL 172
           NL KS YEKELMA+ L+IQHWRPYL+ R FT     KSLR LLQQ+I + D QN  AKL 
Sbjct: 195 NLTKSAYEKELMAVALSIQHWRPYLMGRKFTVCTDQKSLRQLLQQQITTMDQQNWAAKLF 254

Query: 173 GYQFDVICKPGRENSAADSLSRRSEEAELRVITSFPFWSQYMQIQQEI 316
           GYQFD++ KPG EN  AD+LSR  +  EL  +  +P W +  ++ +E+
Sbjct: 255 GYQFDILYKPGLENKGADALSRVHDSPELHSLVHYPEWLEGKEVLEEV 302


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  108 bits (271), Expect = 3e-22
 Identities = 61/110 (55%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
 Frame = +2

Query: 5    NLAKSTYEKELMALVLAIQHWRPYLISRVFT*----KSLRHLLQQRIVSAD*QNRVAKLL 172
            NL KS YEKELMA+VLAIQHWRPYL+ R F      KSL+ LLQQR+V+A+ QN  AKLL
Sbjct: 710  NLTKSAYEKELMAVVLAIQHWRPYLLGRRFVVSTDQKSLKQLLQQRVVTAEQQNWAAKLL 769

Query: 173  GYQFDVICKPGRENSAADSLSRRSEEAEL-RVITSFPFWSQYMQIQQEIA 319
            GY F++I KPG+ N  AD+LSR  E+ EL + ITS   W     +++E++
Sbjct: 770  GYDFEIIYKPGKLNKGADALSRVREDGELCQGITSVQ-WKDEKLLREELS 818


>ref|XP_004169413.1| PREDICTED: uncharacterized protein LOC101228880 [Cucumis sativus]
          Length = 1099

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 4/92 (4%)
 Frame = +2

Query: 11   AKSTYEKELMALVLAIQHWRPYLISRVFT*K----SLRHLLQQRIVSAD*QNRVAKLLGY 178
            A+  YE+ELMA+VLA+Q WRPYL+ R F  K    SL+ LL+QR++    Q  +AKLLGY
Sbjct: 962  ARPIYERELMAVVLAVQRWRPYLLGRTFIVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGY 1021

Query: 179  QFDVICKPGRENSAADSLSRRSEEAELRVITS 274
             F+V+ KPG EN  AD+LSR +  A L  +T+
Sbjct: 1022 SFEVMYKPGLENKVADALSRVTLVAHLNNLTA 1053


>ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211870, partial [Cucumis
           sativus]
          Length = 674

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
 Frame = +2

Query: 11  AKSTYEKELMALVLAIQHWRPYLISRVFT*K----SLRHLLQQRIVSAD*QNRVAKLLGY 178
           AK  YE+ELMA+VLA+Q WRPYLI R F  K    SL+ LL+QR++       +AKLLGY
Sbjct: 402 AKPVYERELMAVVLAVQRWRPYLIRRQFIVKTDQHSLKFLLEQRVIQPQYHKWIAKLLGY 461

Query: 179 QFDVICKPGRENSAADSLSRRSEEAELRVITS 274
            F+V+ KPG EN AAD+LSR      L  +T+
Sbjct: 462 SFEVVYKPGLENKAADALSRVPPTVFLNQLTA 493


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/105 (45%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
 Frame = +2

Query: 14   KSTYEKELMALVLAIQHWRPYLISRVFT*----KSLRHLLQQRIVSAD*QNRVAKLLGYQ 181
            K  YE+ELMA+V+A+Q WRPYL+ + F      KSL+ LL+QR++    Q  VAKLLGY 
Sbjct: 1869 KPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYS 1928

Query: 182  FDVICKPGRENSAADSLSRRSEEAELRVITSFPFWSQYMQIQQEI 316
            F+V  KPG EN AAD+LSR     +L  +T+ P     + +++E+
Sbjct: 1929 FEVQYKPGLENKAADALSRVPPAVQLSSLTA-PALIDLLVVKKEV 1972


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