BLASTX nr result

ID: Atractylodes21_contig00041799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041799
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lyc...   128   6e-28
ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258...   115   3e-24
ref|XP_002511928.1| conserved hypothetical protein [Ricinus comm...   111   7e-23
ref|XP_003548621.1| PREDICTED: uncharacterized protein LOC100799...   109   2e-22
gb|ACU19833.1| unknown [Glycine max]                                  109   2e-22

>ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lycopersicum]
           gi|94549041|gb|ABF39005.1| plant cell wall protein
           SlTFR88 [Solanum lycopersicum]
          Length = 226

 Score =  128 bits (321), Expect = 6e-28
 Identities = 57/89 (64%), Positives = 75/89 (84%)
 Frame = +2

Query: 17  PPGQSKARRTMRMNITIDIMVDSLLGNPNLQSDLGTGLLTMSSYTSVGGRVKFLTFIKRQ 196
           PPG+SKAR+TMRMN+TIDIM D ++ +P LQ D+ +GLLTM+SYTSVGGRVK L  IK+ 
Sbjct: 138 PPGKSKARKTMRMNVTIDIMTDKIMSHPGLQDDISSGLLTMNSYTSVGGRVKLLNMIKKY 197

Query: 197 VTLRMNCTVKINIASRSIEDQKCRRKVKL 283
           V ++MNC++ +NI S+SI+DQKC +KVKL
Sbjct: 198 VVVKMNCSITVNITSQSIQDQKCTKKVKL 226


>ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258567 [Vitis vinifera]
           gi|147832282|emb|CAN73280.1| hypothetical protein
           VITISV_040609 [Vitis vinifera]
           gi|297745338|emb|CBI40418.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  115 bits (289), Expect = 3e-24
 Identities = 51/89 (57%), Positives = 74/89 (83%)
 Frame = +2

Query: 17  PPGQSKARRTMRMNITIDIMVDSLLGNPNLQSDLGTGLLTMSSYTSVGGRVKFLTFIKRQ 196
           PPGQ+KARRTM+MN+TI+I++DSL+ NP+L +D+ +G+L M++Y+ V GRVK L  IK+ 
Sbjct: 132 PPGQAKARRTMKMNVTIEIILDSLMSNPSLLTDISSGILPMNTYSRVPGRVKMLKIIKKH 191

Query: 197 VTLRMNCTVKINIASRSIEDQKCRRKVKL 283
           V ++MNC+V +NI SRSI++QKC+R V L
Sbjct: 192 VVVKMNCSVTVNITSRSIQEQKCKRDVNL 220


>ref|XP_002511928.1| conserved hypothetical protein [Ricinus communis]
           gi|223549108|gb|EEF50597.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 218

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/89 (57%), Positives = 70/89 (78%)
 Frame = +2

Query: 17  PPGQSKARRTMRMNITIDIMVDSLLGNPNLQSDLGTGLLTMSSYTSVGGRVKFLTFIKRQ 196
           PPG SKARRTMR+N TID++ D L+ NPNL +D  TGLLT+ SYT + G+VK L  IK+ 
Sbjct: 131 PPGHSKARRTMRLNATIDLVADKLISNPNLNTDAATGLLTVDSYTKLPGKVKIL-IIKKH 189

Query: 197 VTLRMNCTVKINIASRSIEDQKCRRKVKL 283
           VT++MNC++ +NI+S++I+ QKC+ KV L
Sbjct: 190 VTIKMNCSLTVNISSQAIQSQKCKNKVDL 218


>ref|XP_003548621.1| PREDICTED: uncharacterized protein LOC100799820 [Glycine max]
          Length = 219

 Score =  109 bits (273), Expect = 2e-22
 Identities = 48/89 (53%), Positives = 72/89 (80%)
 Frame = +2

Query: 17  PPGQSKARRTMRMNITIDIMVDSLLGNPNLQSDLGTGLLTMSSYTSVGGRVKFLTFIKRQ 196
           PPG++KARRT+RMN+TID++   ++ +P+  +DLG+GLLTMSS++ V G+VK L  IKR 
Sbjct: 131 PPGRAKARRTLRMNVTIDVITARVISSPDFVTDLGSGLLTMSSFSRVPGQVKILNLIKRH 190

Query: 197 VTLRMNCTVKINIASRSIEDQKCRRKVKL 283
           V ++MNCT   NI++++I++Q C+RKVKL
Sbjct: 191 VVVKMNCTTTFNISTQAIKEQSCKRKVKL 219


>gb|ACU19833.1| unknown [Glycine max]
          Length = 219

 Score =  109 bits (273), Expect = 2e-22
 Identities = 48/89 (53%), Positives = 72/89 (80%)
 Frame = +2

Query: 17  PPGQSKARRTMRMNITIDIMVDSLLGNPNLQSDLGTGLLTMSSYTSVGGRVKFLTFIKRQ 196
           PPG++KARRT+RMN+TID++   ++ +P+  +DLG+GLLTMSS++ V G+VK L  IKR 
Sbjct: 131 PPGRAKARRTLRMNVTIDVIAARVISSPDFVTDLGSGLLTMSSFSRVPGQVKILNLIKRH 190

Query: 197 VTLRMNCTVKINIASRSIEDQKCRRKVKL 283
           V ++MNCT   NI++++I++Q C+RKVKL
Sbjct: 191 VVVKMNCTTTFNISTQAIKEQSCKRKVKL 219


Top