BLASTX nr result

ID: Atractylodes21_contig00041791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041791
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   196   5e-48
ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   194   1e-47
ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative...   192   5e-47
ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|2...   189   8e-46
ref|XP_003610757.1| ATP-dependent RNA helicase SUPV3L1 [Medicago...   186   5e-45

>ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Glycine max]
          Length = 600

 Score =  196 bits (498), Expect = 5e-48
 Identities = 96/134 (71%), Positives = 111/134 (82%)
 Frame = -1

Query: 795 PISLHDKYLFCLSPADMSDEILSQGLTQFAHTYAKKGIVRLREIFTPGTLKVPKTEAELK 616
           P+ LH+KYLFC+SPADM DEI SQGLTQFA  YAKKG+VRLREIFTPG+LKVPKT A LK
Sbjct: 466 PLGLHEKYLFCISPADMDDEISSQGLTQFAENYAKKGLVRLREIFTPGSLKVPKTPAALK 525

Query: 615 ELESIHKVLELYVWLSFRLEDSFPDRELGSSQKSICGMLIEEFLERLGFQKPLPKQLKQF 436
           ELESIHKVL+LYVWLSFRLE+SFPD EL  SQK+IC MLIEEFLERLG+QKP+ ++L   
Sbjct: 526 ELESIHKVLDLYVWLSFRLEESFPDHELAVSQKAICSMLIEEFLERLGWQKPMARRLASH 585

Query: 435 R*PSNA*SSNIYHC 394
           +  S   S ++  C
Sbjct: 586 KMSSPLLSQHMRKC 599


>ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Glycine max]
          Length = 565

 Score =  194 bits (494), Expect = 1e-47
 Identities = 96/131 (73%), Positives = 112/131 (85%)
 Frame = -1

Query: 795 PISLHDKYLFCLSPADMSDEILSQGLTQFAHTYAKKGIVRLREIFTPGTLKVPKTEAELK 616
           P+ LH+KYLFC+SPADM DEI SQGL QFA  YAKKG+VRLREIFTPG+LKVPKT A LK
Sbjct: 431 PLGLHEKYLFCISPADMDDEISSQGLAQFAENYAKKGLVRLREIFTPGSLKVPKTPAALK 490

Query: 615 ELESIHKVLELYVWLSFRLEDSFPDRELGSSQKSICGMLIEEFLERLGFQKPLPKQLKQF 436
           ELESIHKVL+LYVWLSFRLE+SFPD EL +SQK+IC MLIEEFLERLG+QKP+ ++L   
Sbjct: 491 ELESIHKVLDLYVWLSFRLEESFPDHELAASQKAICSMLIEEFLERLGWQKPMARRL--- 547

Query: 435 R*PSNA*SSNI 403
             PS+  SS++
Sbjct: 548 --PSHKMSSSL 556


>ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
           gi|223543730|gb|EEF45258.1| ATP-dependent RNA and DNA
           helicase, putative [Ricinus communis]
          Length = 547

 Score =  192 bits (489), Expect = 5e-47
 Identities = 94/131 (71%), Positives = 111/131 (84%)
 Frame = -1

Query: 795 PISLHDKYLFCLSPADMSDEILSQGLTQFAHTYAKKGIVRLREIFTPGTLKVPKTEAELK 616
           P+SL+DKYLFC+SP DM+DEI SQGLTQFA  YAKKGIVRL+EIFTPGTL+VPKT+  LK
Sbjct: 413 PLSLNDKYLFCISPVDMNDEISSQGLTQFAENYAKKGIVRLKEIFTPGTLQVPKTQTALK 472

Query: 615 ELESIHKVLELYVWLSFRLEDSFPDRELGSSQKSICGMLIEEFLERLGFQKPLPKQLKQF 436
           ELES+HKVL+LYVWLS+RLEDSFPDREL +SQK+IC +LIEEFLERLG+QKP   +L   
Sbjct: 473 ELESVHKVLDLYVWLSYRLEDSFPDRELAASQKAICSLLIEEFLERLGWQKPRTTKLSSR 532

Query: 435 R*PSNA*SSNI 403
              S+  S +I
Sbjct: 533 NKTSSLLSKDI 543


>ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|222864797|gb|EEF01928.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  189 bits (479), Expect = 8e-46
 Identities = 94/118 (79%), Positives = 105/118 (88%)
 Frame = -1

Query: 795 PISLHDKYLFCLSPADMSDEILSQGLTQFAHTYAKKGIVRLREIFTPGTLKVPKTEAELK 616
           PISLHDKYLF +SP DM +EI SQGLTQFA  YA+KGIVRL+EIFTPGTL+VPKTE+ LK
Sbjct: 436 PISLHDKYLFVISPVDMRNEISSQGLTQFAQNYAQKGIVRLKEIFTPGTLQVPKTESALK 495

Query: 615 ELESIHKVLELYVWLSFRLEDSFPDRELGSSQKSICGMLIEEFLERLGFQKPLPKQLK 442
           ELESIHKVL+LYVWLSFRLEDSFPDREL +SQK+ICG+LIEEFLER G+QK  PK  K
Sbjct: 496 ELESIHKVLDLYVWLSFRLEDSFPDRELAASQKAICGLLIEEFLERFGWQKQ-PKTRK 552


>ref|XP_003610757.1| ATP-dependent RNA helicase SUPV3L1 [Medicago truncatula]
           gi|355512092|gb|AES93715.1| ATP-dependent RNA helicase
           SUPV3L1 [Medicago truncatula]
          Length = 570

 Score =  186 bits (472), Expect = 5e-45
 Identities = 88/117 (75%), Positives = 100/117 (85%)
 Frame = -1

Query: 795 PISLHDKYLFCLSPADMSDEILSQGLTQFAHTYAKKGIVRLREIFTPGTLKVPKTEAELK 616
           P+ L DKYLFC+SPADM DEI SQGLTQF   YAKKG+VRLREIFTPGTLKVP T   LK
Sbjct: 436 PLELRDKYLFCISPADMDDEISSQGLTQFVENYAKKGLVRLREIFTPGTLKVPTTPQALK 495

Query: 615 ELESIHKVLELYVWLSFRLEDSFPDRELGSSQKSICGMLIEEFLERLGFQKPLPKQL 445
           +LESIHKVL+LYVWLSFRLEDSFPD EL  SQK++C MLIEEFL+R G+QKP+ ++L
Sbjct: 496 DLESIHKVLDLYVWLSFRLEDSFPDHELAKSQKALCSMLIEEFLDRYGWQKPMARRL 552


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