BLASTX nr result
ID: Atractylodes21_contig00041770
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00041770
(308 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2... 128 4e-28
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,... 127 9e-28
ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi... 126 2e-27
ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containi... 117 7e-25
ref|XP_002873691.1| pentatricopeptide repeat-containing protein ... 117 1e-24
>ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1|
predicted protein [Populus trichocarpa]
Length = 864
Score = 128 bits (322), Expect = 4e-28
Identities = 61/101 (60%), Positives = 76/101 (75%)
Frame = -1
Query: 308 SPTISTYHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIR 129
SP I TY+ LL GL AG M A ++ + M + G D D+ +YN +SGH +IGNKKEAI+
Sbjct: 677 SPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIK 736
Query: 128 LYCEMISKGFVPQTSTYNVLISEFAKVGMMSQARELMNEMQ 6
YCEM++KG VP+TSTYNVLI +FAKVG M QAREL+NEMQ
Sbjct: 737 FYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQ 777
Score = 60.5 bits (145), Expect = 1e-07
Identities = 28/95 (29%), Positives = 54/95 (56%)
Frame = -1
Query: 290 YHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIRLYCEMI 111
Y++L+ L G A + N+M + G D+ YN + GH + + ++A+ Y +M+
Sbjct: 613 YNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQML 672
Query: 110 SKGFVPQTSTYNVLISEFAKVGMMSQARELMNEMQ 6
++G P TYN+L+ G+MS+A E++++M+
Sbjct: 673 NEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMK 707
Score = 58.9 bits (141), Expect = 4e-07
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Frame = -1
Query: 305 PTISTYHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGN------- 147
P STY+ L+ K G+M A +L N+M R +S Y++ + G +
Sbjct: 748 PKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRI 807
Query: 146 -----KKEAIRLYCEMISKGFVPQTSTYNVLISEFAKVGMMSQARELMNEM 9
+ EA L+ EM KGFVP +T + S FA+ GM+ A+ ++ +M
Sbjct: 808 SKKTYRTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDM 858
Score = 57.8 bits (138), Expect = 9e-07
Identities = 32/95 (33%), Positives = 49/95 (51%)
Frame = -1
Query: 290 YHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIRLYCEMI 111
Y +L+ G K GR A + M E G D YN+ ++G R+G K +A +Y +
Sbjct: 439 YTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLG-KYDAESVYSGIR 497
Query: 110 SKGFVPQTSTYNVLISEFAKVGMMSQARELMNEMQ 6
G P +TYN +I+ + K G + A +L NEM+
Sbjct: 498 ELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMK 532
Score = 56.2 bits (134), Expect = 3e-06
Identities = 28/97 (28%), Positives = 54/97 (55%)
Frame = -1
Query: 299 ISTYHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIRLYC 120
+ Y+ L+ GL + G+ +DA +++ + E G D YN ++ + + G + AI+L+
Sbjct: 471 VVAYNVLINGLLRLGK-YDAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWN 529
Query: 119 EMISKGFVPQTSTYNVLISEFAKVGMMSQARELMNEM 9
EM +P + T N+L+ +K G +A +++NEM
Sbjct: 530 EMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEM 566
>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1016
Score = 127 bits (319), Expect = 9e-28
Identities = 62/101 (61%), Positives = 79/101 (78%)
Frame = -1
Query: 308 SPTISTYHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIR 129
SP I TY+ LL GL AG M + +LF+ M E G + D+ Y+ +SG+ +IGNKKE+IR
Sbjct: 759 SPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIR 818
Query: 128 LYCEMISKGFVPQTSTYNVLISEFAKVGMMSQARELMNEMQ 6
LYCEM+++GFVP+TSTYNVLIS+FAKVG M QAREL+NEMQ
Sbjct: 819 LYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQ 859
Score = 64.7 bits (156), Expect = 7e-09
Identities = 35/95 (36%), Positives = 51/95 (53%)
Frame = -1
Query: 290 YHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIRLYCEMI 111
Y +L+ G KAG+ AL + +M E+ D YN+ ++G G K EA +Y MI
Sbjct: 521 YTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHG-KYEAKSVYSGMI 579
Query: 110 SKGFVPQTSTYNVLISEFAKVGMMSQARELMNEMQ 6
G P +TYN++I + K G + A EL NEM+
Sbjct: 580 EMGLAPNQATYNIMIKAYCKQGELDNALELWNEMK 614
Score = 58.9 bits (141), Expect = 4e-07
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Frame = -1
Query: 305 PTISTYHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGN------- 147
P STY+ L+ K G+M A +L N+M RG S Y++ + G +
Sbjct: 830 PKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRT 889
Query: 146 -----KKEAIRLYCEMISKGFVPQTSTYNVLISEFAKVGMMSQARELMNEM 9
+ +A L EM KGFVP ST + S FA+ G M A +L+ E+
Sbjct: 890 LKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEI 940
Score = 54.7 bits (130), Expect = 8e-06
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 21/119 (17%)
Frame = -1
Query: 299 ISTYHTLLRGLTKAGRMHDALKLFNDMLE-RG------FDIDSDI--------------Y 183
I +Y+TL+ G K G A L +++ E RG F+ID I Y
Sbjct: 182 IVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITY 241
Query: 182 NMFVSGHSRIGNKKEAIRLYCEMISKGFVPQTSTYNVLISEFAKVGMMSQARELMNEMQ 6
+S + + +EA LY EMI GF+P TY+ +++ K G +S+A+EL+ EM+
Sbjct: 242 TTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMK 300
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/97 (27%), Positives = 54/97 (55%)
Frame = -1
Query: 299 ISTYHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIRLYC 120
+ TY+ L+ GL + G+ ++A +++ M+E G + YN+ + + + G A+ L+
Sbjct: 553 VVTYNVLINGLLEHGK-YEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWN 611
Query: 119 EMISKGFVPQTSTYNVLISEFAKVGMMSQARELMNEM 9
EM S +P + T N L+ ++ G + +A ++NEM
Sbjct: 612 EMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEM 648
>ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 126 bits (316), Expect = 2e-27
Identities = 59/100 (59%), Positives = 77/100 (77%)
Frame = -1
Query: 308 SPTISTYHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIR 129
SP I+TY+ LL GL+ G M DA KL ++M ERG ++ YN+ VSGH R+GNK+++I+
Sbjct: 757 SPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIK 816
Query: 128 LYCEMISKGFVPQTSTYNVLISEFAKVGMMSQARELMNEM 9
LYCEMI+KGF+P T TYNVLI ++AK G M QAREL+NEM
Sbjct: 817 LYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEM 856
>ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 117 bits (294), Expect = 7e-25
Identities = 54/101 (53%), Positives = 78/101 (77%)
Frame = -1
Query: 308 SPTISTYHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIR 129
SP ++T++TLL GL AGR+ ++ + N+M +RG + + Y++ V+G+ + NK EA+R
Sbjct: 766 SPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVR 825
Query: 128 LYCEMISKGFVPQTSTYNVLISEFAKVGMMSQARELMNEMQ 6
LYCEM+ KGF+P+ STYN LIS+F+KVGMMSQA+EL NEMQ
Sbjct: 826 LYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQ 866
Score = 67.4 bits (163), Expect = 1e-09
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = -1
Query: 305 PTISTYHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIRL 126
P +STY+ L+ +K G M A +LFN+M RG S Y++ VSG S++ N E +
Sbjct: 837 PKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKF 896
Query: 125 YCEMISKGFVPQTSTYNVLISEFAKVGMMSQARELMNEM 9
+M KGF P T + + F+K GM +AR L+ +
Sbjct: 897 LKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935
Score = 59.3 bits (142), Expect = 3e-07
Identities = 32/95 (33%), Positives = 53/95 (55%)
Frame = -1
Query: 290 YHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIRLYCEMI 111
Y TL+ GL K G + A K+ ++ E+ D+ +YN+F++ +G KEA EM
Sbjct: 527 YTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQ 586
Query: 110 SKGFVPQTSTYNVLISEFAKVGMMSQARELMNEMQ 6
S G P TYN +I+ ++ G ++A +L+N M+
Sbjct: 587 STGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMK 621
Score = 56.6 bits (135), Expect = 2e-06
Identities = 28/98 (28%), Positives = 50/98 (51%)
Frame = -1
Query: 299 ISTYHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIRLYC 120
I+ Y+TL+R L G A+ + +M RG D+ +N + GH + G+ A Y
Sbjct: 699 ITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYD 758
Query: 119 EMISKGFVPQTSTYNVLISEFAKVGMMSQARELMNEMQ 6
+M+ G P +T+N L+ G + ++ ++NEM+
Sbjct: 759 QMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMK 796
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/93 (32%), Positives = 46/93 (49%)
Frame = -1
Query: 284 TLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIRLYCEMISK 105
+L+ GL K G++ A LF +M ERG +D Y + G + GN A ++ E+ K
Sbjct: 494 SLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEK 553
Query: 104 GFVPQTSTYNVLISEFAKVGMMSQARELMNEMQ 6
+P YNV I+ +G +A + EMQ
Sbjct: 554 NLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQ 586
>ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297319528|gb|EFH49950.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 938
Score = 117 bits (293), Expect = 1e-24
Identities = 56/100 (56%), Positives = 74/100 (74%)
Frame = -1
Query: 308 SPTISTYHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIR 129
SP ++TY+T++RGL+ AG + + K ++M RG D YN +SG ++IGNKKE++
Sbjct: 745 SPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMT 804
Query: 128 LYCEMISKGFVPQTSTYNVLISEFAKVGMMSQARELMNEM 9
+YCEMI+ G VP+TSTYNVLISEFAKVG M QA ELM EM
Sbjct: 805 IYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEM 844
Score = 58.9 bits (141), Expect = 4e-07
Identities = 32/100 (32%), Positives = 53/100 (53%)
Frame = -1
Query: 308 SPTISTYHTLLRGLTKAGRMHDALKLFNDMLERGFDIDSDIYNMFVSGHSRIGNKKEAIR 129
SP + + L+ L K G++ A+ L + R +D+ YN +SG G EA +
Sbjct: 126 SPDVFALNVLIHSLCKVGQLSFAISLLRN---RVISVDTVTYNTVISGLCEHGLADEAYQ 182
Query: 128 LYCEMISKGFVPQTSTYNVLISEFAKVGMMSQARELMNEM 9
EM+ G +P T ++N LI F KVG ++A+ L++E+
Sbjct: 183 FLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEI 222