BLASTX nr result

ID: Atractylodes21_contig00041759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041759
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327997.1| GRAS family transcription factor [Populus tr...   363   2e-98
ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifer...   359   4e-97
emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]   359   4e-97
ref|XP_002309782.1| GRAS family transcription factor [Populus tr...   352   4e-95
dbj|BAF91722.1| putative SHORT-ROOT protein [Ipomoea nil]             332   5e-89

>ref|XP_002327997.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222837406|gb|EEE75785.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 411

 Score =  363 bits (933), Expect = 2e-98
 Identities = 187/232 (80%), Positives = 206/232 (88%)
 Frame = -3

Query: 696 HHSPYTNHQTITSSHAYSDSGGGEACPDEDKWASRLLRECARAISIKDSAKINHLLWMLN 517
           ++ P T+H   TS+   SDSG  EAC   +KWAS+LL ECARAIS KDS+KI+HLLWMLN
Sbjct: 10  NNQPQTSH---TSTSRSSDSG--EACGGGNKWASKLLSECARAISEKDSSKIHHLLWMLN 64

Query: 516 ELSSPYGDCDQKLASYFLQALFCKATESGQRCYKTLVSVADKSHCFDSARKLILKFQEVS 337
           EL+SPYGDCDQKLASYFLQALFCKATESGQRC+KTL +VA+KSH FDSARKLILKFQEVS
Sbjct: 65  ELASPYGDCDQKLASYFLQALFCKATESGQRCFKTLTTVAEKSHSFDSARKLILKFQEVS 124

Query: 336 PWTTFGHVASNGAILEAFDGETKLHIIDISNTLCTQWPTLLEALATRSDETPSLKLTVVV 157
           PWTTFGHVASNGAILEA DGE+KLHIIDISNTLCTQWPTLLEALATR+DETP LKLTVVV
Sbjct: 125 PWTTFGHVASNGAILEALDGESKLHIIDISNTLCTQWPTLLEALATRNDETPRLKLTVVV 184

Query: 156 TASMVRSVMKEITQRMEKFARLMGVPFEFNVITTSNKPLGQLTKEELGVQDD 1
           TAS+VRSVMKEI QRMEKFARLMGVPFEF VI+  N  +G+LTKE LGVQ+D
Sbjct: 185 TASIVRSVMKEIGQRMEKFARLMGVPFEFKVISVLNH-IGELTKEGLGVQED 235


>ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifera]
           gi|296081342|emb|CBI17688.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score =  359 bits (921), Expect = 4e-97
 Identities = 188/236 (79%), Positives = 206/236 (87%)
 Frame = -3

Query: 708 MERTHHSPYTNHQTITSSHAYSDSGGGEACPDEDKWASRLLRECARAISIKDSAKINHLL 529
           M+ +++ P T+H   TS+   SDSG  E C    KWAS LL+ECARAIS KDS++I+HLL
Sbjct: 28  MQSSNNQPQTSH---TSTSRSSDSG--EPCVT-GKWASSLLKECARAISDKDSSRIHHLL 81

Query: 528 WMLNELSSPYGDCDQKLASYFLQALFCKATESGQRCYKTLVSVADKSHCFDSARKLILKF 349
           WMLNEL+SPYGDCDQKLASYFLQALFCKATESG RCYKTL SVA+KSH FDSARKLILKF
Sbjct: 82  WMLNELASPYGDCDQKLASYFLQALFCKATESGHRCYKTLSSVAEKSHSFDSARKLILKF 141

Query: 348 QEVSPWTTFGHVASNGAILEAFDGETKLHIIDISNTLCTQWPTLLEALATRSDETPSLKL 169
           QEVSPWTTFGHVASNGAILEA +GETKLHIIDISNTLCTQWPTLLEALATR+DETP LKL
Sbjct: 142 QEVSPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLEALATRNDETPRLKL 201

Query: 168 TVVVTASMVRSVMKEITQRMEKFARLMGVPFEFNVITTSNKPLGQLTKEELGVQDD 1
           TVVVTAS+VRSVMKEI QRMEKFARLMGVPFEF VI+  N  LG+LTKE LGV+DD
Sbjct: 202 TVVVTASLVRSVMKEIGQRMEKFARLMGVPFEFQVISGVNH-LGELTKEGLGVRDD 256


>emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]
          Length = 436

 Score =  359 bits (921), Expect = 4e-97
 Identities = 188/236 (79%), Positives = 206/236 (87%)
 Frame = -3

Query: 708 MERTHHSPYTNHQTITSSHAYSDSGGGEACPDEDKWASRLLRECARAISIKDSAKINHLL 529
           M+ +++ P T+H   TS+   SDSG  E C    KWAS LL+ECARAIS KDS++I+HLL
Sbjct: 28  MQSSNNQPQTSH---TSTSRSSDSG--EPCVT-GKWASSLLKECARAISDKDSSRIHHLL 81

Query: 528 WMLNELSSPYGDCDQKLASYFLQALFCKATESGQRCYKTLVSVADKSHCFDSARKLILKF 349
           WMLNEL+SPYGDCDQKLASYFLQALFCKATESG RCYKTL SVA+KSH FDSARKLILKF
Sbjct: 82  WMLNELASPYGDCDQKLASYFLQALFCKATESGHRCYKTLSSVAEKSHSFDSARKLILKF 141

Query: 348 QEVSPWTTFGHVASNGAILEAFDGETKLHIIDISNTLCTQWPTLLEALATRSDETPSLKL 169
           QEVSPWTTFGHVASNGAILEA +GETKLHIIDISNTLCTQWPTLLEALATR+DETP LKL
Sbjct: 142 QEVSPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLEALATRNDETPRLKL 201

Query: 168 TVVVTASMVRSVMKEITQRMEKFARLMGVPFEFNVITTSNKPLGQLTKEELGVQDD 1
           TVVVTAS+VRSVMKEI QRMEKFARLMGVPFEF VI+  N  LG+LTKE LGV+DD
Sbjct: 202 TVVVTASLVRSVMKEIGQRMEKFARLMGVPFEFQVISGVNH-LGELTKEGLGVRDD 256


>ref|XP_002309782.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222852685|gb|EEE90232.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 411

 Score =  352 bits (904), Expect = 4e-95
 Identities = 182/232 (78%), Positives = 205/232 (88%)
 Frame = -3

Query: 696 HHSPYTNHQTITSSHAYSDSGGGEACPDEDKWASRLLRECARAISIKDSAKINHLLWMLN 517
           ++ P T+H   TS+   SDSG  EAC   +KWASRLL ECARAIS KDS+KI++LLWMLN
Sbjct: 10  NNQPQTSH---TSTSRSSDSG--EACGAGNKWASRLLSECARAISEKDSSKIHNLLWMLN 64

Query: 516 ELSSPYGDCDQKLASYFLQALFCKATESGQRCYKTLVSVADKSHCFDSARKLILKFQEVS 337
           EL+SPYGDC+QKLAS+FLQALFCKAT+SGQRC+KTL +VA+KSH FDSARKLILKFQEVS
Sbjct: 65  ELASPYGDCEQKLASHFLQALFCKATDSGQRCFKTLTTVAEKSHSFDSARKLILKFQEVS 124

Query: 336 PWTTFGHVASNGAILEAFDGETKLHIIDISNTLCTQWPTLLEALATRSDETPSLKLTVVV 157
           PWTTFGHVASNGAILEA DG +KLHIIDIS+TLCTQWPTLLEALATR+DETP LKLTVVV
Sbjct: 125 PWTTFGHVASNGAILEALDGASKLHIIDISHTLCTQWPTLLEALATRNDETPHLKLTVVV 184

Query: 156 TASMVRSVMKEITQRMEKFARLMGVPFEFNVITTSNKPLGQLTKEELGVQDD 1
           TAS+VRSVMKEI QRMEKFARLMGVPFE NVI+  N  LG+LTK+ LGVQ+D
Sbjct: 185 TASIVRSVMKEIGQRMEKFARLMGVPFELNVISGLNH-LGELTKDRLGVQED 235


>dbj|BAF91722.1| putative SHORT-ROOT protein [Ipomoea nil]
          Length = 412

 Score =  332 bits (851), Expect = 5e-89
 Identities = 168/211 (79%), Positives = 187/211 (88%), Gaps = 1/211 (0%)
 Frame = -3

Query: 630 GEACPDEDKWASRLLRECARAISIKDSAKINHLLWMLNELSSPYGDCDQKLASYFLQALF 451
           G A  D  KWA RLLRECA AIS KDSAKI+ LLWMLNEL+SPYGDCDQKLA++FLQALF
Sbjct: 18  GSADRDGGKWAERLLRECAGAISEKDSAKIHQLLWMLNELASPYGDCDQKLAAHFLQALF 77

Query: 450 CKATESGQRCYKTLVSVADKSHCFDSARKLILKFQEVSPWTTFGHVASNGAILEAFDGET 271
           CKATE+G +CYKTL+SV++KSH FDSARKLILKFQEVSPWTTFGHVASNGAILEA DGET
Sbjct: 78  CKATETGPKCYKTLLSVSEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGET 137

Query: 270 KLHIIDISNTLCTQWPTLLEALATRSDETPSLKLTVVVT-ASMVRSVMKEITQRMEKFAR 94
           KLHIIDISNT CTQWPTLLEALATR+DETP LKLTVVVT A++V+S MKEI QRMEKFAR
Sbjct: 138 KLHIIDISNTFCTQWPTLLEALATRNDETPHLKLTVVVTAATVVKSFMKEIAQRMEKFAR 197

Query: 93  LMGVPFEFNVITTSNKPLGQLTKEELGVQDD 1
           LMGVPFEFNV++     LG++TK+ L V+DD
Sbjct: 198 LMGVPFEFNVVSGLTH-LGEITKDVLNVRDD 227


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