BLASTX nr result

ID: Atractylodes21_contig00041742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041742
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   172   3e-41
emb|CBI36964.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_002515265.1| pentatricopeptide repeat-containing protein,...   169   3e-40
ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38

>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  172 bits (436), Expect = 3e-41
 Identities = 79/161 (49%), Positives = 116/161 (72%)
 Frame = +1

Query: 1   FLLTFYASLHNKVEIHRIWDVLKSSFEATSNTSYRVMLQALAKLEDLDGLKSCFEEWESN 180
           FL++ YA ++N  E++R+W+ LKS+F  T+N SY +MLQALA L D+DGLK CFEEW+S+
Sbjct: 290 FLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSS 349

Query: 181 CSYYDTRLANVVISAYLRHGMVEEAELIFHGSVKRSNGPFVQTLALFMKHYLRNQQIDLA 360
           C  +D RLANV + A+L   M+++AE I + +VKRS+GPF   L +FM H+L+ ++ID A
Sbjct: 350 CFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTA 409

Query: 361 LKCLETALAQAETSNWYPHSDSIDVFMNYFEKEGDVESAEK 483
           LK +E A ++ + + W P  + +  F+ YFE+E DVE AEK
Sbjct: 410 LKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEK 450


>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  172 bits (436), Expect = 3e-41
 Identities = 79/161 (49%), Positives = 116/161 (72%)
 Frame = +1

Query: 1   FLLTFYASLHNKVEIHRIWDVLKSSFEATSNTSYRVMLQALAKLEDLDGLKSCFEEWESN 180
           FL++ YA ++N  E++R+W+ LKS+F  T+N SY +MLQALA L D+DGLK CFEEW+S+
Sbjct: 329 FLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSS 388

Query: 181 CSYYDTRLANVVISAYLRHGMVEEAELIFHGSVKRSNGPFVQTLALFMKHYLRNQQIDLA 360
           C  +D RLANV + A+L   M+++AE I + +VKRS+GPF   L +FM H+L+ ++ID A
Sbjct: 389 CFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTA 448

Query: 361 LKCLETALAQAETSNWYPHSDSIDVFMNYFEKEGDVESAEK 483
           LK +E A ++ + + W P  + +  F+ YFE+E DVE AEK
Sbjct: 449 LKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEK 489


>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  169 bits (427), Expect = 3e-40
 Identities = 78/162 (48%), Positives = 111/162 (68%)
 Frame = +1

Query: 1   FLLTFYASLHNKVEIHRIWDVLKSSFEATSNTSYRVMLQALAKLEDLDGLKSCFEEWESN 180
           FL++ YA   N  E++R+W +LKSSF   +N SY VMLQALAKL+D++G+  CF EWES 
Sbjct: 286 FLISIYAGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVEGVAKCFREWESG 345

Query: 181 CSYYDTRLANVVISAYLRHGMVEEAELIFHGSVKRSNGPFVQTLALFMKHYLRNQQIDLA 360
           C+ YD R+ANV I  +L+H M EEAELIF  ++KR+ GPF +    FM  +L+  Q+DLA
Sbjct: 346 CTNYDMRIANVAIRVFLQHDMYEEAELIFDDALKRTRGPFFKARERFMLFFLKIHQLDLA 405

Query: 361 LKCLETALAQAETSNWYPHSDSIDVFMNYFEKEGDVESAEKL 486
           LK +  A +++E   W P  ++++ + +YF  E DV+ AEKL
Sbjct: 406 LKHMRAAFSESEKHEWKPLQETVNAYFDYFRTEKDVDGAEKL 447


>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  163 bits (413), Expect = 1e-38
 Identities = 78/162 (48%), Positives = 105/162 (64%)
 Frame = +1

Query: 1   FLLTFYASLHNKVEIHRIWDVLKSSFEATSNTSYRVMLQALAKLEDLDGLKSCFEEWESN 180
           FL+T YA   N  E++R+W+ LKS+F  T+N SY  ML  LAKL+D++GL  CF+EWES+
Sbjct: 256 FLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCFKEWESS 315

Query: 181 CSYYDTRLANVVISAYLRHGMVEEAELIFHGSVKRSNGPFVQTLALFMKHYLRNQQIDLA 360
           C  YD RLANV I A L H M EEA LIF  ++KR+ G F     +FM  +L+N Q+DLA
Sbjct: 316 CHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAREMFMVFFLKNHQLDLA 375

Query: 361 LKCLETALAQAETSNWYPHSDSIDVFMNYFEKEGDVESAEKL 486
           LK ++ A ++ +   W P   ++  F  YFE E DV  AE+L
Sbjct: 376 LKHMKAAFSEVKEIEWQPEPKTVSAFFAYFEDEKDVNGAERL 417


>ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|222843242|gb|EEE80789.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/162 (48%), Positives = 108/162 (66%)
 Frame = +1

Query: 1   FLLTFYASLHNKVEIHRIWDVLKSSFEATSNTSYRVMLQALAKLEDLDGLKSCFEEWESN 180
           FL++ YA   N  E+HR+W+ LKSSF  T+N SY  +LQALAKL+D++G+  CF+EWES+
Sbjct: 258 FLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQALAKLKDVEGILKCFKEWESS 317

Query: 181 CSYYDTRLANVVISAYLRHGMVEEAELIFHGSVKRSNGPFVQTLALFMKHYLRNQQIDLA 360
           C  YD  LANV I A L H M EEA  IF  ++KR+ G F +   +FM  +L+N Q DLA
Sbjct: 318 CHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLFFKAREMFMVFFLKNHQPDLA 377

Query: 361 LKCLETALAQAETSNWYPHSDSIDVFMNYFEKEGDVESAEKL 486
           LK ++ A ++A+   W P   ++  F+NYFE   DV+ AE+L
Sbjct: 378 LKHMKAAFSEAKEIEWQPDQKTVSAFLNYFEDGKDVDGAERL 419


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