BLASTX nr result

ID: Atractylodes21_contig00041726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041726
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|2...   157   7e-37
ref|XP_002516536.1| ring finger protein, putative [Ricinus commu...   155   3e-36
ref|XP_002281341.2| PREDICTED: E3 ubiquitin-protein ligase ATL42...   154   1e-35
emb|CAN66948.1| hypothetical protein VITISV_020095 [Vitis vinifera]   154   1e-35
ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   144   6e-33

>ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|222854583|gb|EEE92130.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  157 bits (398), Expect = 7e-37
 Identities = 81/155 (52%), Positives = 103/155 (66%), Gaps = 9/155 (5%)
 Frame = -1

Query: 439 VCLSKFEDSEVLRLLPKCRHAFHMNCIDKWLESHSSCPLCRYQFDMSDVTSTTCTNSLRY 260
           VC+SKFEDS+VLRLLPKC+HAFH NCID+WL+SHSSCPLCRY+ D  DV S T + S R+
Sbjct: 117 VCISKFEDSDVLRLLPKCKHAFHENCIDQWLKSHSSCPLCRYKIDPKDVKSFTYSRSWRH 176

Query: 259 PQDDGL----NNLEIFVRREHDXXXXXXXXXXXXXXXXXXXSPEEDVLIQYG-----NQR 107
            Q+        NLEIFV REHD                   S +E++L+Q G     N++
Sbjct: 177 LQNPSNLAEDPNLEIFVEREHDRQVSSCFNPGSSFQISNDNSKKEELLVQAGGNADDNRK 236

Query: 106 LLDKFKHRIIVSDIVCKSRWSDVNSSDLMFLNSKM 2
           L  KF H+II+SD++ KSRWSD NSSD + LN++M
Sbjct: 237 LFHKFMHKIIISDVLIKSRWSDANSSDFLSLNTEM 271


>ref|XP_002516536.1| ring finger protein, putative [Ricinus communis]
           gi|223544356|gb|EEF45877.1| ring finger protein,
           putative [Ricinus communis]
          Length = 407

 Score =  155 bits (393), Expect = 3e-36
 Identities = 81/153 (52%), Positives = 105/153 (68%), Gaps = 7/153 (4%)
 Frame = -1

Query: 439 VCLSKFEDSEVLRLLPKCRHAFHMNCIDKWLESHSSCPLCRYQFDMSDVTSTTCTNSLRY 260
           VCLS+FED E+LRLLPKC+HAFH NCID+WLESHSSCPLCRY+FD +++ S   +NSLRY
Sbjct: 120 VCLSRFEDIEILRLLPKCKHAFHKNCIDQWLESHSSCPLCRYKFDPNELKSFRYSNSLRY 179

Query: 259 PQ------DDGLNNLEIFVRREHDXXXXXXXXXXXXXXXXXXXSPEEDVLIQYG-NQRLL 101
            Q      DD   NLE+F+ RE D                     +E++L Q G N++ L
Sbjct: 180 SQTPSNLADD--PNLELFIHREQD--------YQGSSTFNLGKGKKEELLSQEGHNKKFL 229

Query: 100 DKFKHRIIVSDIVCKSRWSDVNSSDLMFLNSKM 2
            KFKH+IIVSD++ K+RWSD NSSDL+ ++S+M
Sbjct: 230 HKFKHKIIVSDVIIKNRWSDFNSSDLLSMSSEM 262


>ref|XP_002281341.2| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Vitis vinifera]
          Length = 413

 Score =  154 bits (388), Expect = 1e-35
 Identities = 80/157 (50%), Positives = 102/157 (64%), Gaps = 11/157 (7%)
 Frame = -1

Query: 439 VCLSKFEDSEVLRLLPKCRHAFHMNCIDKWLESHSSCPLCRYQFDMSDVTSTTCTNSLRY 260
           VCLSKFE+ EVLRLLP CRHAFH+NCID+WLESHSSCPLCRY+FD  D+T+ + +NSLR+
Sbjct: 118 VCLSKFEEIEVLRLLPNCRHAFHINCIDQWLESHSSCPLCRYKFDAQDLTNFSYSNSLRF 177

Query: 259 PQDDGLN-----NLEIFVRREHDXXXXXXXXXXXXXXXXXXXSPEEDVLIQYGN------ 113
           PQ+  LN      + +FV+RE D                     +E+ LIQ G       
Sbjct: 178 PQNP-LNLAEDSTINLFVQREQDDQGSSRFSIGSSFQKAMNKGKKEEFLIQEGESSNGDY 236

Query: 112 QRLLDKFKHRIIVSDIVCKSRWSDVNSSDLMFLNSKM 2
            +L  K  H+II S+++ K+RWSD NSSD MFLNS+M
Sbjct: 237 HKLWHKVNHKIIFSNMIFKNRWSDANSSDFMFLNSEM 273


>emb|CAN66948.1| hypothetical protein VITISV_020095 [Vitis vinifera]
          Length = 915

 Score =  154 bits (388), Expect = 1e-35
 Identities = 81/157 (51%), Positives = 103/157 (65%), Gaps = 11/157 (7%)
 Frame = -1

Query: 439  VCLSKFEDSEVLRLLPKCRHAFHMNCIDKWLESHSSCPLCRYQFDMSDVTSTTCTNSLRY 260
            VCLSKFE+ EVLRLLP CRHAFH+NCID+WLESHSSCPLCRY+FD  D+T+ + +NSLR+
Sbjct: 620  VCLSKFEEIEVLRLLPNCRHAFHINCIDQWLESHSSCPLCRYKFDAQDLTNFSYSNSLRF 679

Query: 259  PQDDGLN-----NLEIFVRREHDXXXXXXXXXXXXXXXXXXXSPEEDVLIQYGN------ 113
            PQ+  LN      + +FV+RE D                     +E+ LIQ G       
Sbjct: 680  PQNP-LNLAEDSTINLFVQREQDDQXSSRFSIGSSFQKAMNKGKKEEFLIQEGESSNGDY 738

Query: 112  QRLLDKFKHRIIVSDIVCKSRWSDVNSSDLMFLNSKM 2
             +L  K  H+II S+++ K+RWSD NSSD MFLNS+M
Sbjct: 739  HKLWHKVNHKIIFSNMIFKNRWSDANSSDFMFLNSEM 775


>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score =  144 bits (364), Expect = 6e-33
 Identities = 75/156 (48%), Positives = 102/156 (65%), Gaps = 10/156 (6%)
 Frame = -1

Query: 439 VCLSKFEDSEVLRLLPKCRHAFHMNCIDKWLESHSSCPLCRYQFDMSDVTSTTCTNSLRY 260
           VCLSKFED E+LRLLPKC+HAFH++C+D+WLE HSSCPLCR++    D+   T +NSLR+
Sbjct: 118 VCLSKFEDIEILRLLPKCKHAFHIDCVDQWLEKHSSCPLCRHKVSAEDLAILTYSNSLRF 177

Query: 259 PQDDG----LNNLEIFVRREHDXXXXXXXXXXXXXXXXXXXSPEED-VLIQ-----YGNQ 110
             +       +NLE+FV+RE D                     EE+ VLIQ       ++
Sbjct: 178 LWNQSELRENSNLELFVQREEDHHGSSRFSIGSSFRKVEKGVKEEESVLIQEEEDDNDDE 237

Query: 109 RLLDKFKHRIIVSDIVCKSRWSDVNSSDLMFLNSKM 2
           ++L K  H+IIVSD+V K+RWS V+SSDLM+LNS++
Sbjct: 238 KILHKINHKIIVSDVVLKNRWSSVSSSDLMYLNSEL 273


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