BLASTX nr result

ID: Atractylodes21_contig00041688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041688
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA66473.1| GT-1 [Arabidopsis thaliana]                            114   1e-23
ref|NP_172802.2| DNA binding protein GT-1 [Arabidopsis thaliana]...   114   1e-23
ref|XP_002315635.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002312646.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_002514968.1| transcription factor, putative [Ricinus comm...   109   3e-22

>gb|AAA66473.1| GT-1 [Arabidopsis thaliana]
          Length = 406

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/75 (70%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
 Frame = -1

Query: 227 LNLERRLDQEGHPLAITAANNTMAGSGVSPWNWRETPGNGDIGN-NTYGGRVISVKLGDY 51
           LNLERRLD +GHPLAIT A + +A +GV+PWNWRETPGNGD  +   +GGRVI+VK GDY
Sbjct: 225 LNLERRLDHDGHPLAITTAVDAVAANGVTPWNWRETPGNGDDSHGQPFGGRVITVKFGDY 284

Query: 50  TRRIGIDGSPDAIKE 6
           TRRIG+DGS +AIKE
Sbjct: 285 TRRIGVDGSAEAIKE 299


>ref|NP_172802.2| DNA binding protein GT-1 [Arabidopsis thaliana]
           gi|75334447|sp|Q9FX53.1|TGT1_ARATH RecName:
           Full=Trihelix transcription factor GT-1; AltName:
           Full=Trihelix DNA-binding protein GT-1
           gi|9958053|gb|AAG09542.1|AC011810_1 DNA binding protein
           GT-1 [Arabidopsis thaliana] gi|110736565|dbj|BAF00248.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332190897|gb|AEE29018.1| DNA binding protein GT-1
           [Arabidopsis thaliana]
          Length = 406

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/75 (70%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
 Frame = -1

Query: 227 LNLERRLDQEGHPLAITAANNTMAGSGVSPWNWRETPGNGDIGN-NTYGGRVISVKLGDY 51
           LNLERRLD +GHPLAIT A + +A +GV+PWNWRETPGNGD  +   +GGRVI+VK GDY
Sbjct: 225 LNLERRLDHDGHPLAITTAVDAVAANGVTPWNWRETPGNGDDSHGQPFGGRVITVKFGDY 284

Query: 50  TRRIGIDGSPDAIKE 6
           TRRIG+DGS +AIKE
Sbjct: 285 TRRIGVDGSAEAIKE 299


>ref|XP_002315635.1| predicted protein [Populus trichocarpa] gi|222864675|gb|EEF01806.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/74 (75%), Positives = 62/74 (83%)
 Frame = -1

Query: 227 LNLERRLDQEGHPLAITAANNTMAGSGVSPWNWRETPGNGDIGNNTYGGRVISVKLGDYT 48
           LNLERRLD +GHPLAITAA+  +A SGV  WNWRETPGNG   N +YGGRVISVK GDYT
Sbjct: 205 LNLERRLDHDGHPLAITAAD-AVAASGVPAWNWRETPGNG-AENQSYGGRVISVKYGDYT 262

Query: 47  RRIGIDGSPDAIKE 6
           RRIG+DG+ DAIKE
Sbjct: 263 RRIGVDGTADAIKE 276


>ref|XP_002312646.1| predicted protein [Populus trichocarpa] gi|222852466|gb|EEE90013.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/74 (74%), Positives = 63/74 (85%)
 Frame = -1

Query: 227 LNLERRLDQEGHPLAITAANNTMAGSGVSPWNWRETPGNGDIGNNTYGGRVISVKLGDYT 48
           LNLERRLD +GHPLAITAA+  +A SGV PWNWRETPGNG   + ++GGRVISVK GDYT
Sbjct: 206 LNLERRLDHDGHPLAITAAD-AVAASGVPPWNWRETPGNG-AESQSFGGRVISVKSGDYT 263

Query: 47  RRIGIDGSPDAIKE 6
           RRIGIDG+ DAI+E
Sbjct: 264 RRIGIDGTTDAIRE 277


>ref|XP_002514968.1| transcription factor, putative [Ricinus communis]
           gi|223546019|gb|EEF47522.1| transcription factor,
           putative [Ricinus communis]
          Length = 398

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/74 (72%), Positives = 63/74 (85%)
 Frame = -1

Query: 227 LNLERRLDQEGHPLAITAANNTMAGSGVSPWNWRETPGNGDIGNNTYGGRVISVKLGDYT 48
           LNLERRLD +GHPLAITAA+  +A SGV PWNWRETPG+G  G + +GGRVI+VK GDYT
Sbjct: 219 LNLERRLDHDGHPLAITAAD-AVAASGVPPWNWRETPGSGAEGQS-FGGRVITVKYGDYT 276

Query: 47  RRIGIDGSPDAIKE 6
           RRIGIDG+ DAI+E
Sbjct: 277 RRIGIDGTADAIRE 290


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