BLASTX nr result

ID: Atractylodes21_contig00041678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041678
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...   221   5e-56
ref|XP_002322735.1| tubulin gamma complex-associated protein [Po...   221   5e-56
ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   217   7e-55
ref|XP_002309295.1| tubulin gamma complex-associated protein [Po...   215   3e-54
ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubuli...   213   1e-53

>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis
           vinifera]
          Length = 854

 Score =  221 bits (563), Expect = 5e-56
 Identities = 106/146 (72%), Positives = 125/146 (85%)
 Frame = +3

Query: 27  NGGILFITRDPGNMRDMAYKEFATLVNGENVVSEEVLVRDVLFVCRGIDGKYVKFDDSVD 206
           N G+L +++DP N+R++A +EFA LV  EN VSEEVLVRDVL+ C+GIDGKYVKFD SVD
Sbjct: 158 NNGVLLVSKDPENIREIAVREFANLVKEENEVSEEVLVRDVLYACQGIDGKYVKFDKSVD 217

Query: 207 GYALLDSVKAPKATKIMIRKLSELGWLFRKVKGYICENMDRFPAEDVGTVAKAFCAALQD 386
           GY L DS+K P+AT+I ++KL ELGWLFRKVKGYI E+MDRFPAEDVGTV +AFCAALQD
Sbjct: 218 GYLLRDSIKVPRATRITVQKLCELGWLFRKVKGYISESMDRFPAEDVGTVGQAFCAALQD 277

Query: 387 ELSEYQTLLTVLQSQSMNPIPLVSET 464
           ELS Y  LL VL++QSMNPIPLVSET
Sbjct: 278 ELSHYYKLLAVLEAQSMNPIPLVSET 303


>ref|XP_002322735.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222867365|gb|EEF04496.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 844

 Score =  221 bits (563), Expect = 5e-56
 Identities = 102/144 (70%), Positives = 126/144 (87%)
 Frame = +3

Query: 33  GILFITRDPGNMRDMAYKEFATLVNGENVVSEEVLVRDVLFVCRGIDGKYVKFDDSVDGY 212
           G+LF+T+DP N+R++A++EF  L+  EN VSEEVLVRDVL+ C+GIDGKYVKFD +VDGY
Sbjct: 163 GVLFVTKDPENLREIAFREFVNLIKEENEVSEEVLVRDVLYACQGIDGKYVKFDANVDGY 222

Query: 213 ALLDSVKAPKATKIMIRKLSELGWLFRKVKGYICENMDRFPAEDVGTVAKAFCAALQDEL 392
            LLDS+K P+ T++M+RKL ELGWLFRKVKGYI E+MDRFPAEDVGTV +AFCAALQ+EL
Sbjct: 223 VLLDSIKVPRGTRVMVRKLCELGWLFRKVKGYISESMDRFPAEDVGTVGQAFCAALQNEL 282

Query: 393 SEYQTLLTVLQSQSMNPIPLVSET 464
            +Y  LL VL++Q+MNPIPLVSET
Sbjct: 283 LDYYKLLAVLEAQAMNPIPLVSET 306


>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223527963|gb|EEF30048.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 855

 Score =  217 bits (553), Expect = 7e-55
 Identities = 100/145 (68%), Positives = 124/145 (85%)
 Frame = +3

Query: 27  NGGILFITRDPGNMRDMAYKEFATLVNGENVVSEEVLVRDVLFVCRGIDGKYVKFDDSVD 206
           N G+L + +DP N+R+ A+KE+  LV  E+ V+EEVLVRDVL+ C+GIDG+YVKFD ++D
Sbjct: 159 NNGVLLVAKDPENLREFAFKEYVNLVKEESEVTEEVLVRDVLYACQGIDGRYVKFDANID 218

Query: 207 GYALLDSVKAPKATKIMIRKLSELGWLFRKVKGYICENMDRFPAEDVGTVAKAFCAALQD 386
           GY L+D+VK P AT++M+RKL ELGWLFRKVKGYI E+MDRFPAEDVGTV +AFCAALQD
Sbjct: 219 GYVLMDNVKVPTATRLMVRKLCELGWLFRKVKGYISESMDRFPAEDVGTVGQAFCAALQD 278

Query: 387 ELSEYQTLLTVLQSQSMNPIPLVSE 461
           ELSEY  LL VL++QSMNPIPL+SE
Sbjct: 279 ELSEYYKLLAVLEAQSMNPIPLISE 303


>ref|XP_002309295.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222855271|gb|EEE92818.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 860

 Score =  215 bits (547), Expect = 3e-54
 Identities = 98/146 (67%), Positives = 127/146 (86%)
 Frame = +3

Query: 27  NGGILFITRDPGNMRDMAYKEFATLVNGENVVSEEVLVRDVLFVCRGIDGKYVKFDDSVD 206
           + G+L +++DP N+ ++A++EF  +V  EN VSEEVLVRDVL+VC+GIDG+YVKFD++VD
Sbjct: 164 DNGVLLVSKDPENLLEIAFREFVNMVKEENEVSEEVLVRDVLYVCQGIDGQYVKFDENVD 223

Query: 207 GYALLDSVKAPKATKIMIRKLSELGWLFRKVKGYICENMDRFPAEDVGTVAKAFCAALQD 386
           GY L DS+K P+ T++M+RKL ELGWLFRKVKGYI E+MDRFPAEDVGTV +AFCAALQD
Sbjct: 224 GYVLSDSIKVPRGTRVMVRKLCELGWLFRKVKGYISESMDRFPAEDVGTVGQAFCAALQD 283

Query: 387 ELSEYQTLLTVLQSQSMNPIPLVSET 464
           ELS+Y  LL VL++Q+MNPIPLVS++
Sbjct: 284 ELSDYYKLLAVLEAQAMNPIPLVSKS 309


>ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubulin complex component
           3-like [Cucumis sativus]
          Length = 846

 Score =  213 bits (543), Expect = 1e-53
 Identities = 101/153 (66%), Positives = 126/153 (82%)
 Frame = +3

Query: 3   GYSPRKLKNGGILFITRDPGNMRDMAYKEFATLVNGENVVSEEVLVRDVLFVCRGIDGKY 182
           G +P K    G+L + +DP N+RD+A+KEF+ L+  EN V+EEVLVRDVL+ C+GIDGKY
Sbjct: 143 GAAPEKEWQKGVLLVAKDPENLRDVAFKEFSNLLKEENEVTEEVLVRDVLYACQGIDGKY 202

Query: 183 VKFDDSVDGYALLDSVKAPKATKIMIRKLSELGWLFRKVKGYICENMDRFPAEDVGTVAK 362
           VKFD++ DGY L + VKA +AT+ M+RKL E+GWLFRKVKGYI E+M+RFPAED+GTV  
Sbjct: 203 VKFDNNSDGYVLSNLVKASRATRTMVRKLCEMGWLFRKVKGYISESMERFPAEDIGTVGH 262

Query: 363 AFCAALQDELSEYQTLLTVLQSQSMNPIPLVSE 461
           AFCAALQDELSEY  LL +L++QSMNPIPLVSE
Sbjct: 263 AFCAALQDELSEYYKLLAILEAQSMNPIPLVSE 295


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