BLASTX nr result

ID: Atractylodes21_contig00041632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041632
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA63753.1| cyclin A-like protein [Nicotiana tabacum]             132   3e-29
ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]                   120   1e-25
dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]                   120   1e-25

>emb|CAA63753.1| cyclin A-like protein [Nicotiana tabacum]
          Length = 314

 Score =  132 bits (332), Expect = 3e-29
 Identities = 80/149 (53%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
 Frame = -3

Query: 442 MADQEN-KRVTRMAKKRAMEAIESQLQPAKKNRVVLGELSNNAVVSGNENMGSDLXXXXX 266
           MADQEN  RVTR+AKKRA EA+   LQ   K RVVLGE+ N   +S    M         
Sbjct: 1   MADQENCVRVTRLAKKRAAEAMVQHLQQPNKKRVVLGEIRN---LSNQIQMFDSEPLKPK 57

Query: 265 XXXXXXXXXXXXXXXXXXXEMIVERTDEKVSD-PQMCEAYVVDIYEYLHNMEIEAKRRPM 89
                              E   E  D K+ D PQMC AYV DIYEYLH MEIE KRRP+
Sbjct: 58  CNKQTTKRKVKRSVSVKEREFREEDVDSKLDDDPQMCSAYVSDIYEYLHQMEIEKKRRPL 117

Query: 88  AEYVEKVQKDVTANMRAILVDWLVEVAEE 2
           ++Y+EKVQKDVTANMR +LVDWLVEVAEE
Sbjct: 118 SDYLEKVQKDVTANMRGVLVDWLVEVAEE 146


>ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|222842883|gb|EEE80430.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  128 bits (321), Expect = 5e-28
 Identities = 75/150 (50%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
 Frame = -3

Query: 442 MADQEN-KRVTRMAKKRAMEAIESQLQPAKKNRVVLGELSN--NAVVSGNENMGSDLXXX 272
           MA+QEN  RVTR AKKRA     ++ QP  K RVVLGEL N  NA+VS NE         
Sbjct: 1   MAEQENCTRVTRAAKKRAAALASTEDQPLNKKRVVLGELPNLSNAIVSSNEPQKQKAKAK 60

Query: 271 XXXXXXXXXXXXXXXXXXXXXEMIVERTDEKVSDPQMCEAYVVDIYEYLHNMEIEAKRRP 92
                                 ++ E  D    DPQMC  Y  DIYEYLH ME++ KRRP
Sbjct: 61  PKARKGASTKKEG---------VLKEDVDGNPEDPQMCAPYASDIYEYLHKMEVDPKRRP 111

Query: 91  MAEYVEKVQKDVTANMRAILVDWLVEVAEE 2
           + +Y+EKVQKDV+ NMR ILVDWLVEVAEE
Sbjct: 112 LPDYIEKVQKDVSPNMRGILVDWLVEVAEE 141


>ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|222835505|gb|EEE73940.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  120 bits (301), Expect = 1e-25
 Identities = 71/151 (47%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
 Frame = -3

Query: 445 SMADQEN-KRVTRMAKKRAMEAIESQLQPAKKNRVVLGELSN--NAVVSGNENMGSDLXX 275
           S++++EN  R+TR AKKRA     ++ +P  K RVVLGEL N  N  VS NE        
Sbjct: 3   SISEKENCVRITRAAKKRAAALASAEDRPLNKKRVVLGELPNLSNTTVSVNE-------- 54

Query: 274 XXXXXXXXXXXXXXXXXXXXXXEMIVERTDEKVSDPQMCEAYVVDIYEYLHNMEIEAKRR 95
                                  +  E  D K  DPQMC  Y  DIYEYLH ME++ KRR
Sbjct: 55  -VHKQKAKTKSNTSKRTLTKKEGVFKEDVDGKPEDPQMCAPYASDIYEYLHKMEVDPKRR 113

Query: 94  PMAEYVEKVQKDVTANMRAILVDWLVEVAEE 2
           P+ +Y+EKVQKDV+ NMR ILVDWLVEVAEE
Sbjct: 114 PLPDYIEKVQKDVSPNMRGILVDWLVEVAEE 144


>dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]
          Length = 306

 Score =  120 bits (300), Expect = 1e-25
 Identities = 75/156 (48%), Positives = 94/156 (60%), Gaps = 9/156 (5%)
 Frame = -3

Query: 442 MADQENK-RVTRMAKKRAMEAIE-SQLQPAKKNRVVLGELSNNAVVSGNENMGSDLXXXX 269
           MAD+EN  RVTR+AKKRA+EA+  S+ Q   K RVVLGEL N   +S N +         
Sbjct: 1   MADKENCIRVTRLAKKRAVEAMAASEQQRPSKKRVVLGELKN---LSSNISSIQTYDFSS 57

Query: 268 XXXXXXXXXXXXXXXXXXXXEMIVERTDE-------KVSDPQMCEAYVVDIYEYLHNMEI 110
                               E+  ++ +E       +  DPQMC AYV DIYEYLH ME+
Sbjct: 58  GPQKQQKNKNKRKAKESLGFEVKEKKVEEAGIDVFSQSDDPQMCGAYVSDIYEYLHKMEM 117

Query: 109 EAKRRPMAEYVEKVQKDVTANMRAILVDWLVEVAEE 2
           E KRRP+ +Y++KVQKDVTANMR +L+DWLVEVAEE
Sbjct: 118 ETKRRPLPDYLDKVQKDVTANMRGVLIDWLVEVAEE 153


>dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]
          Length = 372

 Score =  120 bits (300), Expect = 1e-25
 Identities = 75/156 (48%), Positives = 94/156 (60%), Gaps = 9/156 (5%)
 Frame = -3

Query: 442 MADQENK-RVTRMAKKRAMEAIE-SQLQPAKKNRVVLGELSNNAVVSGNENMGSDLXXXX 269
           MAD+EN  RVTR+AKKRA+EA+  S+ Q   K RVVLGEL N   +S N +         
Sbjct: 1   MADKENCIRVTRLAKKRAVEAMAASEQQRPSKKRVVLGELKN---LSSNISSIQTYDFSS 57

Query: 268 XXXXXXXXXXXXXXXXXXXXEMIVERTDE-------KVSDPQMCEAYVVDIYEYLHNMEI 110
                               E+  ++ +E       +  DPQMC AYV DIYEYLH ME+
Sbjct: 58  GPQKQQKNKNKRKAKESLGFEVKEKKVEEAGIDVFSQSDDPQMCGAYVSDIYEYLHKMEM 117

Query: 109 EAKRRPMAEYVEKVQKDVTANMRAILVDWLVEVAEE 2
           E KRRP+ +Y++KVQKDVTANMR +L+DWLVEVAEE
Sbjct: 118 ETKRRPLPDYLDKVQKDVTANMRGVLIDWLVEVAEE 153


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