BLASTX nr result

ID: Atractylodes21_contig00041629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041629
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, put...   191   4e-47
emb|CBI37538.3| unnamed protein product [Vitis vinifera]              182   3e-44
ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis...   182   3e-44
emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]   182   3e-44
ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43

>ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223530792|gb|EEF32657.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 543

 Score =  191 bits (486), Expect = 4e-47
 Identities = 87/137 (63%), Positives = 105/137 (76%)
 Frame = +3

Query: 6   VVYLTCDLLGQEEILVGVCQTFGSKIFIDKENNPECFQSLSLTVPDILSQDPSSRFHIFD 185
           +VYLTCDLLGQEE+L  V +TFGSKI+++K  NPECF +L+LTVP IL+QDPSSRFH+F+
Sbjct: 182 IVYLTCDLLGQEELLANVSRTFGSKIYVEKAANPECFHALTLTVPQILTQDPSSRFHVFN 241

Query: 186 GFPXXXXXXXXXXXXXXXNFQPEPLIIRPSAQWYVFEDISSEAEKRKNVRFKEAMRDQFG 365
           GFP               +FQPEPLIIRPSAQWY  E+  S  E R+ +R  EA+RDQFG
Sbjct: 242 GFPMLYERAAAKVAEAQASFQPEPLIIRPSAQWYACEEEESGTESRRKLRLSEAVRDQFG 301

Query: 366 IWHVCYSIHSSRDELEW 416
           IWHVCYS+HSSR+ELEW
Sbjct: 302 IWHVCYSMHSSREELEW 318


>emb|CBI37538.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  182 bits (461), Expect = 3e-44
 Identities = 86/137 (62%), Positives = 100/137 (72%)
 Frame = +3

Query: 6   VVYLTCDLLGQEEILVGVCQTFGSKIFIDKENNPECFQSLSLTVPDILSQDPSSRFHIFD 185
           +VYL  D+LGQEEIL+ V + FGSKIF+DK NNPECFQ+L+  VP+ILSQDPSSRF +F+
Sbjct: 216 IVYLCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMVPEILSQDPSSRFQVFE 275

Query: 186 GFPXXXXXXXXXXXXXXXNFQPEPLIIRPSAQWYVFEDISSEAEKRKNVRFKEAMRDQFG 365
           GFP               N  PEPLIIRPSAQWY  E+   + E+RK   F EA+RDQFG
Sbjct: 276 GFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTERRKKESFNEAVRDQFG 335

Query: 366 IWHVCYSIHSSRDELEW 416
           IWHVCYSIHSSR ELEW
Sbjct: 336 IWHVCYSIHSSRQELEW 352


>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
          Length = 552

 Score =  182 bits (461), Expect = 3e-44
 Identities = 86/137 (62%), Positives = 100/137 (72%)
 Frame = +3

Query: 6   VVYLTCDLLGQEEILVGVCQTFGSKIFIDKENNPECFQSLSLTVPDILSQDPSSRFHIFD 185
           +VYL  D+LGQEEIL+ V + FGSKIF+DK NNPECFQ+L+  VP+ILSQDPSSRF +F+
Sbjct: 182 IVYLCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMVPEILSQDPSSRFQVFE 241

Query: 186 GFPXXXXXXXXXXXXXXXNFQPEPLIIRPSAQWYVFEDISSEAEKRKNVRFKEAMRDQFG 365
           GFP               N  PEPLIIRPSAQWY  E+   + E+RK   F EA+RDQFG
Sbjct: 242 GFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTERRKKESFNEAVRDQFG 301

Query: 366 IWHVCYSIHSSRDELEW 416
           IWHVCYSIHSSR ELEW
Sbjct: 302 IWHVCYSIHSSRQELEW 318


>emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]
          Length = 1066

 Score =  182 bits (461), Expect = 3e-44
 Identities = 86/137 (62%), Positives = 100/137 (72%)
 Frame = +3

Query: 6    VVYLTCDLLGQEEILVGVCQTFGSKIFIDKENNPECFQSLSLTVPDILSQDPSSRFHIFD 185
            +VYL  D+LGQEEIL+ V + FGSKIF+DK NNPECFQ+L+  VP+ILSQDPSSRF +F+
Sbjct: 696  IVYLCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMVPEILSQDPSSRFQVFE 755

Query: 186  GFPXXXXXXXXXXXXXXXNFQPEPLIIRPSAQWYVFEDISSEAEKRKNVRFKEAMRDQFG 365
            GFP               N  PEPLIIRPSAQWY  E+   + E+RK   F EA+RDQFG
Sbjct: 756  GFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTERRKKESFNEAVRDQFG 815

Query: 366  IWHVCYSIHSSRDELEW 416
            IWHVCYSIHSSR ELEW
Sbjct: 816  IWHVCYSIHSSRQELEW 832


>ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|222852812|gb|EEE90359.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  180 bits (456), Expect = 1e-43
 Identities = 84/137 (61%), Positives = 102/137 (74%)
 Frame = +3

Query: 6   VVYLTCDLLGQEEILVGVCQTFGSKIFIDKENNPECFQSLSLTVPDILSQDPSSRFHIFD 185
           VVYLTCDLLGQE++L  V +TFGSKIF+D+  N E F++L+LTVP+IL+QDPSSRFH+FD
Sbjct: 182 VVYLTCDLLGQEDVLAAVSETFGSKIFVDEVANTESFRALTLTVPEILTQDPSSRFHMFD 241

Query: 186 GFPXXXXXXXXXXXXXXXNFQPEPLIIRPSAQWYVFEDISSEAEKRKNVRFKEAMRDQFG 365
           GFP               N QPEPLIIRPSAQWY  E+  SE E ++ +RF EA+RD   
Sbjct: 242 GFPKLYERAAKKIAEAQANLQPEPLIIRPSAQWYACEEGYSETESQRKLRFNEAVRDPNS 301

Query: 366 IWHVCYSIHSSRDELEW 416
           +WHVCYS+HSSR ELEW
Sbjct: 302 VWHVCYSMHSSRGELEW 318


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