BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041624
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   137   1e-30
ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   134   8e-30
gb|AAM64761.1| contains similarity to photomorphogenesis repress...   131   5e-29
ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ric...   130   9e-29
ref|XP_002872071.1| nucleotide binding protein [Arabidopsis lyra...   130   1e-28

>ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 383

 Score =  137 bits (344), Expect = 1e-30
 Identities = 68/114 (59%), Positives = 81/114 (71%), Gaps = 4/114 (3%)
 Frame = +2

Query: 44  DGPISDTLGAIEVNSSGTLFATGGIARKIRVYSLDSLLSPG----GAEAPLLVDHATACH 211
           DG  +DT+G IE + S  L  TGGIARKIRVYS+ S LS      G      + H  AC 
Sbjct: 51  DGASTDTIGIIEFDPSDNLVVTGGIARKIRVYSIKSFLSDENHSHGERKVTWLQHNDACD 110

Query: 212 CCICTPAKLSSLKWKPGSAGRVMGSADYDGGVTEYDLETQMPVFERDEHNGRRV 373
             +CTPAKLSSL+WKPGSAGRV+GS DYDG VTEYDL+ ++P+FERDEH GRR+
Sbjct: 111 YYVCTPAKLSSLRWKPGSAGRVLGSGDYDGVVTEYDLDQKIPIFERDEHGGRRI 164


>ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 382

 Score =  134 bits (337), Expect = 8e-30
 Identities = 70/114 (61%), Positives = 83/114 (72%), Gaps = 5/114 (4%)
 Frame = +2

Query: 47  GPISDTLGAIEVNSSGTLFATGGIARKIRVYSLDSLLSPG-----GAEAPLLVDHATACH 211
           G  +DT+G IE + S  L ATGGIARKIRVYS+ SLL PG     G     L+ H  AC 
Sbjct: 52  GASTDTIGVIEFDPSDNLVATGGIARKIRVYSVKSLL-PGENHSHGEHNVKLLQHNNACD 110

Query: 212 CCICTPAKLSSLKWKPGSAGRVMGSADYDGGVTEYDLETQMPVFERDEHNGRRV 373
             I TPAKLSSL+WKPGS+GRV+GS DYDG VTEYDL+ ++P+FERDEH GRR+
Sbjct: 111 YYIWTPAKLSSLRWKPGSSGRVLGSGDYDGVVTEYDLDRKIPIFERDEHGGRRI 164


>gb|AAM64761.1| contains similarity to photomorphogenesis repressor protein
           [Arabidopsis thaliana]
          Length = 385

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/106 (62%), Positives = 76/106 (71%)
 Frame = +2

Query: 56  SDTLGAIEVNSSGTLFATGGIARKIRVYSLDSLLSPGGAEAPLLVDHATACHCCICTPAK 235
           SD +GAIE + +G + ATGGIARKIR Y L SLL           DH TA   CICTPAK
Sbjct: 71  SDAIGAIEFDPTGEIIATGGIARKIRSYRLSSLLESRD-------DHVTASESCICTPAK 123

Query: 236 LSSLKWKPGSAGRVMGSADYDGGVTEYDLETQMPVFERDEHNGRRV 373
           LSSLKW+P  +GRV+GS DYDG VTEYD+E Q+PV ERDEH GRR+
Sbjct: 124 LSSLKWRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRI 169


>ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
           gi|223531761|gb|EEF33581.1| ubiquitin ligase protein
           cop1, putative [Ricinus communis]
          Length = 426

 Score =  130 bits (328), Expect = 9e-29
 Identities = 65/109 (59%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
 Frame = +2

Query: 59  DTLGAIEVNSSGTLFATGGIARKIRVYSLDSLLSPG----GAEAPLLVDHATACHCCICT 226
           D LG IE + S  + ATGGIARKIR+YS+ SLL             L+DH  AC   ICT
Sbjct: 98  DALGVIEFDQSENIVATGGIARKIRIYSIKSLLPQEQQHENGNDIALMDHVNACEFFICT 157

Query: 227 PAKLSSLKWKPGSAGRVMGSADYDGGVTEYDLETQMPVFERDEHNGRRV 373
           PAKLSSL+WKP S GRV+GS DYDG V EYD+ET++P+FERDEH GRR+
Sbjct: 158 PAKLSSLRWKPCSGGRVIGSGDYDGVVMEYDVETRIPIFERDEHGGRRI 206


>ref|XP_002872071.1| nucleotide binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317908|gb|EFH48330.1| nucleotide binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score =  130 bits (326), Expect = 1e-28
 Identities = 66/108 (61%), Positives = 75/108 (69%), Gaps = 2/108 (1%)
 Frame = +2

Query: 56  SDTLGAIEVNSSGTLFATGGIARKIRVYSLDSLLSPGGAEAP--LLVDHATACHCCICTP 229
           SD +GAIE + +  + AT GI+RKIR Y L SLL            VD ATAC   ICTP
Sbjct: 37  SDVIGAIEFDPTDNIVATAGISRKIRFYGLPSLLRTNAVSGTGVSFVDQATACEYYICTP 96

Query: 230 AKLSSLKWKPGSAGRVMGSADYDGGVTEYDLETQMPVFERDEHNGRRV 373
           AKLSSL+W+PGS  RV+GS DYDG VTEYDLE + PVFERDEH GRRV
Sbjct: 97  AKLSSLRWRPGSGSRVIGSGDYDGVVTEYDLEKRTPVFERDEHGGRRV 144