BLASTX nr result

ID: Atractylodes21_contig00041470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00041470
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    79   5e-13
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    69   3e-10
ref|XP_004166527.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    69   5e-10
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    69   5e-10
emb|CAN60437.1| hypothetical protein VITISV_035177 [Vitis vinifera]    67   2e-09

>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
 Frame = -3

Query: 306  LESWTHKPEYQKWISKLLGYHFDIHYKPGPNNRAADALSRQRPDIECSAMRGPIWRNWEN 127
            LE    +P+YQKW++KLLGY F++ YKPG  N+AADALSR  P ++ S++  P   +   
Sbjct: 1908 LEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPPAVQLSSLTAPALIDLLV 1967

Query: 126  FQQELETYSLLNLIKTEIMNG--NTRHKGFELRQVVLFYKDWLV 1
             ++E+E    L  +  E+ +G  NT  K F +R  +L YKD LV
Sbjct: 1968 VKKEVEEDIRLRKVWDELQSGEENTERK-FSIRHGMLRYKDRLV 2010


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = -3

Query: 282  EYQKWISKLLGYHFDIHYKPGPNNRAADALSRQR-PDIECSAMRGPIWRNWENFQQELET 106
            E+QKW+SKL+GY F+IHYKPG +NR ADALSR+   ++E  A+       W   ++E+  
Sbjct: 1069 EFQKWVSKLMGYDFEIHYKPGLSNRVADALSRKTVGEVELGAIVAVQGVEWAELRREITG 1128

Query: 105  YSLLNLIKTEIMNGNT 58
             S L  ++ E+  G T
Sbjct: 1129 DSFLTQVRKELQEGRT 1144


>ref|XP_004166527.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226839 [Cucumis sativus]
          Length = 739

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/93 (37%), Positives = 55/93 (59%)
 Frame = -3

Query: 282 EYQKWISKLLGYHFDIHYKPGPNNRAADALSRQRPDIECSAMRGPIWRNWENFQQELETY 103
           +YQKWISKLLG+ F++ YKPG  N+AADAL R  P +  + + GP   +    ++E++  
Sbjct: 31  QYQKWISKLLGFSFEVLYKPGLENKAADALLRMPPTVHLNNLTGPTMIDLAVIKEEVDKD 90

Query: 102 SLLNLIKTEIMNGNTRHKGFELRQVVLFYKDWL 4
             L  I  E+     ++  + ++Q +L YKD L
Sbjct: 91  KRLQQIIAELNKKGGQNIKYSMQQGMLKYKDRL 123


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
 Frame = -3

Query: 282  EYQKWISKLLGYHFDIHYKPGPNNRAADALSRQRPDIE-CSAMRGPIWRNWENFQQELET 106
            E Q W +KLLGY F+I YKPG  N+ ADALSR R D E C  +    W++ +  ++EL  
Sbjct: 760  EQQNWAAKLLGYDFEIIYKPGKLNKGADALSRVREDGELCQGITSVQWKDEKLLREELSR 819

Query: 105  YSLLNLIKTEIMNGNTRHKGFELRQVVLFYKDWLV 1
             S L  I  ++    +   G+ L+Q VL Y+  LV
Sbjct: 820  DSQLQKIIGDLQRDASSRPGYMLKQGVLLYEGRLV 854


>emb|CAN60437.1| hypothetical protein VITISV_035177 [Vitis vinifera]
          Length = 818

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/82 (42%), Positives = 54/82 (65%)
 Frame = -3

Query: 282 EYQKWISKLLGYHFDIHYKPGPNNRAADALSRQRPDIECSAMRGPIWRNWENFQQELETY 103
           E+QKW++KLLGY FDI Y+ G  NRAADALS Q P+     +  P+  ++E  Q+E+ET 
Sbjct: 452 EHQKWLTKLLGYTFDIQYRLGLENRAADALS-QYPEFTTLTL-SPV-MDFEEIQKEVETD 508

Query: 102 SLLNLIKTEIMNGNTRHKGFEL 37
             +N I+ E++ GN ++  + +
Sbjct: 509 EAVNHIRMEVLEGNPKYSDYAI 530